RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 PSD4Q8NDX1 1056 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 ACTRT3Q9BYD9 372 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 SERTAD4Q9NUC0 356 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 GNL3LQ9NVN8 582 aaKnown RBP3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 RLIMQ9NVW2 624 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 ETAA1Q9NY74 926 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 CFAP97Q9P2B7 532 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 DKK3Q9UBP4 350 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 SERGEFQ9UGK8 458 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 MRFAP1Q9Y605 127 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 CFAP20Q9Y6A4 193 aaKnown RBP3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 ACACBO00763 2458 aa3.8□□□□□ -1.8
HMGB1P18-201ENST00000438801 NCOA2Q15596 1464 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 PLEKHG2Q9H7P9 1386 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 TARM1B6A8C7 271 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 NT5C1B-RDH14C9J2C7 533 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 SOAT2O75908 522 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 CHEK2O96017 543 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 PRR35P0CG20 571 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 ITGALP20701 1170 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF135P52742 658 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 KRT85P78386 507 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 BMPR2Q13873 1038 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 HABP2Q14520 560 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 PCBP2Q15366 365 aaKnown RBP eCLIP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 TBCCQ15814 346 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 ABCB5Q2M3G0 1257 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 UAP1L1Q3KQV9 507 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 RBM20Q5T481 1227 aaKnown RBP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF626Q68DY1 528 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 ZNF551Q7Z340 670 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 CNPPD1Q9BV87 410 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 SEMA4CQ9C0C4 833 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 MRPS18AQ9NVS2 196 aaKnown RBP3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 SERPINB13Q9UIV8 391 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 TRHDEQ9UKU6 1024 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 GOLGA3Q08378 1498 aa3.79□□□□□ -1.8
HMGB1P18-201ENST00000438801 WRNQ14191 1432 aaPredicted RBP eCLIP3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 SHTN1A0MZ66 631 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 PRSS29PA6NIE9 313 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 CYSRT1A8MQ03 144 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 FZD9O00144 591 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 TP73O15350 636 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 VPS4BO75351 444 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 NXPH3O95157 252 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 LATS1O95835 1130 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 NDUFB7P17568 137 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 KELP23276 732 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 SMARCA1P28370 1054 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 CTGFP29279 349 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 KRTAP10-9P60411 292 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 DSC2Q02487 901 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLC44A4Q53GD3 710 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 EGFLAMQ63HQ2 1017 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 C11orf87Q6NUJ2 197 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 CEP85Q6P2H3 762 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 GGT6Q6P531 493 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 FAM109AQ8N4B1 249 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 FAM136AQ96C01 138 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 SIK2Q9H0K1 926 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 GPR35Q9HC97 309 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 SLAMF7Q9NQ25 335 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 ARHGEF3Q9NR81 526 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 AGAP1Q9UPQ3 857 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 ATP8A1Q9Y2Q0 1164 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 EID1Q9Y6B2 187 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 PRUNE2Q8WUY3 3088 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 PKD1L3Q7Z443 1732 aa3.78□□□□□ -1.8
HMGB1P18-201ENST00000438801 PLCH1Q4KWH8 1693 aa3.78□□□□□ -1.81
HMGB1P18-201ENST00000438801 C5orf42Q9H799 3197 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 CA12O43570 354 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 JTBO76095 146 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 KIF20AO95235 890 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 RARBP10826 455 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 JUPP14923 745 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 CHRM3P20309 590 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 CERS1P27544 350 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 PCSK6P29122 969 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 PRDX5P30044 214 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 CD6P30203 668 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 PIK3CGP48736 1102 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 TOB1P50616 345 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 ADKP55263 362 aaKnown RBP3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 TUBA4AP68366 448 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 MAPK7Q13164 816 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 MTMR1Q13613 665 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 PROSER3Q2NL68 480 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 DEFB115Q30KQ5 88 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 NEK8Q86SG6 692 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 PNMA8AQ86V59 439 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 C3orf20Q8ND61 904 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 KLHDC4Q8TBB5 520 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 ATRIPQ8WXE1 791 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 TBC1D5Q92609 795 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 REPS1Q96D71 796 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 C1orf43Q9BWL3 253 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 NRIP3Q9NQ35 241 aa3.77□□□□□ -1.81
HMGB1P18-201ENST00000438801 MTMR10Q9NXD2 777 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms