RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 LRRTM3Q86VH5 581 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SH3RF2Q8TEC5 729 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ZBTB45Q96K62 511 aaPredicted RBP13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 KIF2CQ99661 725 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TARS2Q9BW92 718 aaKnown RBP13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PCDHA12Q9UN75 941 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CYP8B1Q9UNU6 501 aa13.31□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CITO14578 2027 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 KNTC1P50748 2209 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 K7ERI5 159 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CILPO75339 1184 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CYP11B2P19099 503 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TYMPP19971 482 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 LRPAP1P30533 357 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 EFNA5P52803 228 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CXADRP78310 365 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ZXDBP98169 803 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 BNC1Q01954 994 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 LY6DQ14210 128 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TAS1R3Q7RTX0 852 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 C12orf40Q86WS4 652 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ZNF419Q96HQ0 510 aaPredicted RBP13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ZCWPW1Q9H0M4 648 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 GAREM1Q9H706 876 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TM7SF3Q9NS93 570 aa13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ERVH48-1M5A8F1 160 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 RRP8O43159 456 aaKnown RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 MED24O75448 989 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 KAT7O95251 611 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CYP17A1P05093 508 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 MCF2P10911 925 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PROZP22891 400 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 WASP42768 502 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 DBX2Q6ZNG2 339 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CATSPER3Q86XQ3 398 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ARL14EPQ8N8R7 260 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SENP8Q96LD8 212 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CDC6Q99741 560 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TCHPQ9BT92 498 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 FAM124BQ9H5Z6 455 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 MYO18AQ92614 2054 aaKnown RBP13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 MYO9AB2RTY4 2548 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 C2orf78A6NCI8 922 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SCAMP3O14828 347 aaKnown RBP13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SLC28A2O43868 658 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 NFATC1O95644 943 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 CKMP06732 381 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 USP17L7P0C7H9 530 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TXKP42681 527 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TLE3Q04726 772 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 KDSRQ06136 332 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PPP2R5AQ15172 486 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PTPRNQ16849 979 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 HSF5Q4G112 596 aaPredicted RBP13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 PNKPQ96T60 521 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 ZDHHC5Q9C0B5 715 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SLC6A17Q9H1V8 727 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 GCNT4Q9P109 453 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 SUSD2Q9UGT4 822 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 HCN2Q9UL51 889 aa13.28□□□□□ -0.28
SMAD9-IT1-201ENST00000437983 TRAV19A0A0A6YYK7 116 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 MYMKA6NI61 221 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 E9PAM4 449 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 DTNBO60941 627 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 DEXIO95424 95 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 APODP05090 189 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 CXCL8P10145 99 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 GNSP15586 552 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 CCDC173Q0VFZ6 552 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 ZBTB6Q15916 424 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 HLA-BQ31612 363 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 TRIM22Q8IYM9 498 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 ZCCHC9Q8N567 271 aaKnown RBP13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 NXPE2Q96DL1 559 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 IFT74Q96LB3 600 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 MRPL4Q9BYD3 311 aaKnown RBP13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 TMEM206Q9H813 350 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 TMLHEQ9NVH6 421 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 AK5Q9Y6K8 562 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 DOPEY2Q9Y3R5 2298 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 KNL1Q8NG31 2342 aa13.27□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 UBR5O95071 2799 aaPredicted RBP13.26□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 A0A0A0MRY4 1105 aa13.26□□□□□ -0.29
SMAD9-IT1-201ENST00000437983 A0A1W2PQF6 199 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms