RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 C2CD4BA6NLJ0 364 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 LRPAP1P30533 357 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 DENND2CQ68D51 928 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 KDM7AQ6ZMT4 941 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 ZWILCHQ9H900 591 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 TRIM17Q9Y577 477 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 INHAP05111 366 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 FAM163BP0C2L3 166 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 KDELR1P24390 212 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 KLRC2P26717 231 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 MIPP30301 263 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 ACTN2P35609 894 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 GNL1P36915 607 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-216ENST00000437340 ADCY8P40145 1251 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 PRMT2P55345 433 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 C1QTNF8P60827 252 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 IFFO1Q0D2I5 559 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 PMF1Q6P1K2 205 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 TRMT10CQ7L0Y3 403 aaKnown RBP26.99■■□□□ 1.91
CPNE1-216ENST00000437340 CROCCP2Q86T23 111 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 SERINC5Q86VE9 423 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 SH2D3CQ8N5H7 860 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 ARRDC4Q8NCT1 418 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 SLAIN1Q8ND83 568 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 CMASQ8NFW8 434 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-216ENST00000437340 NKD2Q969F2 451 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-216ENST00000437340 USP18Q9UMW8 372 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 PTCH2Q9Y6C5 1203 aa26.99■■□□□ 1.91
CPNE1-216ENST00000437340 SPTLC1O15269 473 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 RPS6KA5O75582 802 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 SOX4Q06945 474 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-216ENST00000437340 GDF6Q6KF10 455 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-216ENST00000437340 HOOK3Q86VS8 718 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 SESTD1Q86VW0 696 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 TTC13Q8NBP0 860 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 APPL2Q8NEU8 664 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 SNX25Q9H3E2 840 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 CYLDQ9NQC7 956 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 FAM49BQ9NUQ9 324 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 DNPEPQ9ULA0 475 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 CEP350Q5VT06 3117 aa26.98■■□□□ 1.91
CPNE1-216ENST00000437340 DPYSL4O14531 572 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 TRUB2O95900 331 aaKnown RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 PDGFRAP16234 1089 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 OLFML1Q6UWY5 402 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 LEKR1Q6ZMV7 388 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 BBS12Q6ZW61 710 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 GSTA5Q7RTV2 222 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 HACE1Q8IYU2 909 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 TOP6BLQ8N6T0 577 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 RXFP2Q8WXD0 754 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ACSF2Q96CM8 615 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 PPP1R10Q96QC0 940 aaKnown RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 RNF19AQ9NV58 838 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 DDX20Q9UHI6 824 aaKnown RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ITGAVP06756 1048 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 NR1D1P20393 614 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ITGA8P53708 1063 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 VCPP55072 806 aaKnown RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 SLC6A3Q01959 620 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 TRIP13Q15645 432 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 OASLQ15646 514 aaKnown RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ALLCQ8N6M5 410 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ANKRD52Q8NB46 1076 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 NCAPGQ9BPX3 1015 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 FAM118BQ9BPY3 351 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 CAPS2Q9BXY5 557 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 SENP6Q9GZR1 1112 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-216ENST00000437340 SEMA4AQ9H3S1 761 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ANAPC5Q9UJX4 755 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ST3GAL5Q9UNP4 418 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 ZNF148Q9UQR1 794 aa26.97■■□□□ 1.91
CPNE1-216ENST00000437340 HUS1O60921 280 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 FGFR1P11362 822 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 GRK4P32298 578 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 RGS7P49802 495 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 BCAT1P54687 386 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 PDE4CQ08493 712 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 BST2Q10589 180 aaKnown RBP26.96■■□□□ 1.91
CPNE1-216ENST00000437340 SMTNL2Q2TAL5 461 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 KRT71Q3SY84 523 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 ARFGAP2Q8N6H7 521 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 TMEM109Q9BVC6 243 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 FOXP3Q9BZS1 431 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 SLC38A7Q9NVC3 462 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 WBP1LQ9NX94 342 aa26.96■■□□□ 1.91
CPNE1-216ENST00000437340 PTGESO14684 152 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 RIPK2O43353 540 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 WARSP23381 471 aaKnown RBP26.95■■□□□ 1.9
CPNE1-216ENST00000437340 SCNN1AP37088 669 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 RPL34P49207 117 aaKnown RBP26.95■■□□□ 1.9
CPNE1-216ENST00000437340 LILRA4P59901 499 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 SLC29A2Q14542 456 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 KCTD6Q8NC69 237 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 KLHDC9Q8NEP7 349 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 TNIP3Q96KP6 325 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 DPEP3Q9H4B8 488 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 GOLGA2P5Q9HBQ8 144 aa26.95■■□□□ 1.9
CPNE1-216ENST00000437340 AAASQ9NRG9 546 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms