RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SOX8P57073 446 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 TWIST1Q15672 202 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 FAM187BQ17R55 369 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 MEX3CQ5U5Q3 659 aaKnown RBP4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 EMC10Q5UCC4 262 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 VCPIP1Q96JH7 1222 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 MARK4Q96L34 752 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 SPC25Q9HBM1 224 aa4.12□□□□□ -1.75
HMGB1P31-201ENST00000437242 LY6G6EA0A0G2JKS1 128 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRR23D1E9PI22 279 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 H3BUI4 141 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 hCG_1984214I3L0E3 225 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 OAZ2O95190 189 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRR23D2P0DMB1 279 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 HDCP19113 662 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 HTRA4P83105 476 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 E2F1Q01094 437 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 TRIM71Q2Q1W2 868 aaKnown RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 DPY19L3Q6ZPD9 716 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 USP45Q70EL2 814 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 MMS19Q96T76 1030 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 FOXP1Q9H334 677 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 TRMT13Q9NUP7 481 aaKnown RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 MRPS17Q9Y2R5 130 aaKnown RBP4.11□□□□□ -1.75
HMGB1P31-201ENST00000437242 AP4M1O00189 453 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 A1BGP04217 495 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 CSF1RP07333 972 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 MYCLP12524 364 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 ADORA2AP29274 412 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 KRT17Q04695 432 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 MYO1EQ12965 1108 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 FAM50AQ14320 339 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 PLS1Q14651 629 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 CYP1B1Q16678 543 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 RNASE12Q5GAN4 147 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 MEPCEQ7L2J0 689 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 CAND1Q86VP6 1230 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRR18Q8N4B5 295 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 SMRP1Q8NCR6 262 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 OSR1Q8TAX0 266 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 ADAMTS18Q8TE60 1221 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 MTFMTQ96DP5 389 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 SLC35A4Q96G79 324 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 CXorf36Q9H7Y0 433 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 SARS2Q9NP81 518 aaKnown RBP4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 XPR1Q9UBH6 696 aa4.1□□□□□ -1.75
HMGB1P31-201ENST00000437242 TCRBV5S1A1TA0A578 114 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 BTBD19C9JJ37 291 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 MYO1CO00159 1063 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 VNN1O95497 513 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 CDK11BP21127 795 aaKnown RBP4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 HOXD9P28356 352 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 RECQLP46063 649 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 THBS3P49746 956 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 ZNF91Q05481 1191 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 PGS1Q32NB8 556 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 KHDC1LQ5JSQ8 128 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 BCDIN3DQ7Z5W3 292 aaKnown RBP4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 IZUMO1Q8IYV9 350 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 SIRT6Q8N6T7 355 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 ACRBPQ8NEB7 543 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 CCDC17Q96LX7 622 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 PRR25Q96S07 402 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 SMAD5Q99717 465 aaKnown RBP4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 AMFRQ9UKV5 643 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 PCDHA6Q9UN73 950 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 TMX2Q9Y320 296 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 TNKSO95271 1327 aa4.09□□□□□ -1.75
HMGB1P31-201ENST00000437242 CD8B2A6NJW9 211 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 H3BNX3 289 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ABCC9O60706 1549 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ABLIM3O94929 683 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ALPLP05186 524 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 CYP2C9P11712 490 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 PHKG2P15735 406 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 CDKN1CP49918 316 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 NKX6-1P78426 367 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 MLC1Q15049 377 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 MGAT5BQ3V5L5 792 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 EGFLAMQ63HQ2 1017 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 CATIPQ7Z7H3 387 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 SFTPA1Q8IWL2 248 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ABRAQ8N0Z2 381 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 CNNM1Q9NRU3 951 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 POT1Q9NUX5 634 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ASIC5Q9NY37 505 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 SHROOM4Q9ULL8 1493 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 SNX14Q9Y5W7 946 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 SQORQ9Y6N5 450 aa4.08□□□□□ -1.76
HMGB1P31-201ENST00000437242 ZMYM2Q9UBW7 1377 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 FAM90A8PA6NJQ4 464 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 PSMD9O00233 223 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 CES2O00748 559 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 SNUPNO95149 360 aaKnown RBP4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 POU2F2P09086 479 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 FAM90A13PP0C7W8 464 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 FAM90A24PP0C7X0 464 aa4.07□□□□□ -1.76
HMGB1P31-201ENST00000437242 CYP19A1P11511 503 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 221.4 ms