RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 ZNF516Q92618 1163 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 ACSF2Q96CM8 615 aaPredicted RBP12.94□□□□□ -0.34
TMEM116-202ENST00000437003 OXNAD1Q96HP4 312 aaPredicted RBP12.94□□□□□ -0.34
TMEM116-202ENST00000437003 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 PANX3Q96QZ0 392 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 TUBB6Q9BUF5 446 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
TMEM116-202ENST00000437003 SH3BP5O60239 455 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 OR6B1O95007 311 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 UNGP13051 313 aaPredicted RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 SLC1A1P43005 524 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 INHBCP55103 352 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 GPX6P59796 221 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PLCB3Q01970 1234 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 LMNB2Q03252 620 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 SEZ6Q53EL9 994 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 WDR44Q5JSH3 913 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 C1orf146Q5VVC0 180 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 TMEM270Q6UE05 265 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 MARK2Q7KZI7 788 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 TREML1Q86YW5 311 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 CCDC110Q8TBZ0 833 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 ATP6V0A1Q93050 837 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 VPS33BQ9H267 617 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 C10orf88Q9H8K7 445 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 C17orf75Q9HAS0 396 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 ARHGEF4Q9NR80 690 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 RHBDL2Q9NX52 303 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PCNTO95613 3336 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 E5RJQ4 531 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 HNRNPRO43390 633 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 LIG4P49917 911 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 USP46P62068 366 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 MYBPC3Q14896 1274 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 MTERF2Q49AM1 385 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PABPC1LQ4VXU2 614 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 CENPUQ71F23 418 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 ARHGAP24Q8N264 748 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 RDM1Q8NG50 284 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 JDP2Q8WYK2 163 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 HIC2Q96JB3 615 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 CLIC5Q9NZA1 410 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PPARGC1AQ9UBK2 798 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 PHF24Q9UPV7 400 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 MTO1Q9Y2Z2 717 aaKnown RBP12.93□□□□□ -0.34
TMEM116-202ENST00000437003 MYPNQ86TC9 1320 aa12.93□□□□□ -0.34
TMEM116-202ENST00000437003 UNCXA6NJT0 531 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 A8MXQ7 604 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 LPXNO60711 386 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 CIB2O75838 187 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DLDP09622 509 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 TCF4P15884 667 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 GTF2H1P32780 548 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DSG3P32926 999 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 MCCD1P59942 119 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 ST13P4Q8IZP2 240 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DNAJC1Q96KC8 554 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 PHACTR1Q9C0D0 580 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 IRF2BPLQ9H1B7 796 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 MMADHCQ9H3L0 296 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 MARCOQ9UEW3 520 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 PCDHB4Q9Y5E5 795 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 PCDHB2Q9Y5E7 798 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 CLUHO75153 1309 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 FAM200BP0CF97 657 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 KITP10721 976 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 GLRA2P23416 452 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 LSAMPQ13449 338 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 FAM182AQ5T1J6 154 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SNRNP48Q6IEG0 339 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SPATA24Q86W54 205 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 RHOT1Q8IXI2 618 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 PYROXD1Q8WU10 500 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 GPRASP2Q96D09 838 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 TMEM121Q9BTD3 319 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DNAAF2Q9NVR5 837 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SLC7A8Q9UHI5 535 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SLC24A2Q9UI40 661 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 RABGEF1Q9UJ41 708 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 PTPRJQ12913 1337 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 MEI4A8MW99 385 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 SGK1O00141 431 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 LIASO43766 372 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 DGAT1O75907 488 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
TMEM116-202ENST00000437003 GRIA2P42262 883 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 AP2B1P63010 937 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 GCNT1Q02742 428 aa12.92□□□□□ -0.34
TMEM116-202ENST00000437003 IRF5Q13568 498 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms