RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ZNF840PA6NDX5 716 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ZNF233A6NK53 670 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 K7EQS6 105 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TRIM66O15016 1216 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TGFB1I1O43294 461 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 OAS1P00973 400 aaKnown RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 HDCP19113 662 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 BDNFP23560 247 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CEBPZQ03701 1054 aaKnown RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SURF1Q15526 300 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 DUOXA2Q1HG44 320 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 STPG1Q5TH74 334 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TCEAL3Q969E4 200 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 HPS3Q969F9 1004 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 C8orf48Q96LL4 319 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MRPL45Q9BRJ2 306 aaKnown RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 LINC00597Q9H2U6 94 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 VPS45Q9NRW7 570 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 AGPAT3Q9NRZ7 376 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MAGEC2Q9UBF1 373 aaPredicted RBP11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 USP24Q9UPU5 2620 aa11.7□□□□□ -0.54
SPTLC1P4-201ENST00000435997 UBE4BO95155 1302 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 BCLAF3A2AJT9 711 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 LEFTY2O00292 366 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 DCLK1O15075 740 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 NFATC1O95644 943 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 STAU1O95793 577 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TNNC2P02585 160 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CYP17A1P05093 508 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 FAM163BP0C2L3 166 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 EIF2DP41214 584 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PPP3CCP48454 512 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CACNA2D1P54289 1103 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PSMD6Q15008 389 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SNRNP35Q16560 246 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ST3GAL2Q16842 350 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PMS2CLQ68D20 193 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 STXBP4Q6ZWJ1 553 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CGRRF1Q99675 332 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 XYLT2Q9H1B5 865 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CUEDC2Q9H467 287 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 KIAA1586Q9HCI6 787 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ASPMQ8IZT6 3477 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CFAP47Q6ZTR5 3102 aa11.69□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TCHHQ07283 1943 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 KIAA1549LQ6ZVL6 1849 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 LNP1A1A4G5 178 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ANTXRLA6NF34 631 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 F8VP50 259 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PPP6R2O75170 966 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 GRIK1P39086 918 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CYP24A1Q07973 514 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MESP2Q0VG99 397 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 NR1H3Q13133 447 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ELF2Q15723 593 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 BMT2Q1RMZ1 405 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 FAM26FQ5R3K3 315 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 N4BP2L1Q5TBK1 243 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 C11orf74Q86VG3 221 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PDILTQ8N807 584 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MDGA1Q8NFP4 955 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 OLIG1Q8TAK6 271 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 NOC3LQ8WTT2 800 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SCFD1Q8WVM8 642 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ZFRQ96KR1 1074 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ZNF518BQ9C0D4 1074 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 RNF38Q9H0F5 515 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ZSCAN16Q9H4T2 348 aaPredicted RBP11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 VRTNQ9H8Y1 702 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 EHD2Q9NZN4 543 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TRPM5Q9NZQ8 1165 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ANGPTL2Q9UKU9 493 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 MMP17Q9ULZ9 603 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SDK1Q7Z5N4 2213 aa11.68□□□□□ -0.54
SPTLC1P4-201ENST00000435997 EML5Q05BV3 1969 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 RHOBTB1O94844 696 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 KCNK5O95279 499 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CAVIN2O95810 425 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CST3P01034 146 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 PDGFRBP09619 1106 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 DLATP10515 647 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 HNRNPLP14866 589 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 ANXA13P27216 316 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 SNRPFP62306 86 aaKnown RBP11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CYP27A1Q02318 531 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 TAF10Q12962 218 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 CRY1Q16526 586 aa11.67□□□□□ -0.54
SPTLC1P4-201ENST00000435997 HSF5Q4G112 596 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms