RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 SPG21Q9NZD8 308 aa11.04□□□□□ -0.64
LINC01090-202ENST00000434418 RGL1Q9NZL6 768 aa11.04□□□□□ -0.64
LINC01090-202ENST00000434418 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
LINC01090-202ENST00000434418 ZNF503-AS2A6NEH8 195 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 NRDCO43847 1150 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 ZC3H11AO75152 810 aaKnown RBP eCLIP11.03□□□□□ -0.644e-6■■■■□ 25.4
LINC01090-202ENST00000434418 THBDP07204 575 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 GLI1P08151 1106 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 FDPSP14324 419 aaKnown RBP11.03□□□□□ -0.64
LINC01090-202ENST00000434418 SP100P23497 879 aaPredicted RBP11.03□□□□□ -0.64
LINC01090-202ENST00000434418 PPM1AP35813 382 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 TECP42680 631 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 BCAR1P56945 870 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 KRT17Q04695 432 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 CTTNQ14247 550 aaKnown RBP11.03□□□□□ -0.64
LINC01090-202ENST00000434418 ME3Q16798 604 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 EEF1DP3Q658K8 133 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 PPP4R3AQ6IN85 833 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 ZNF410Q86VK4 478 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 TMEM173Q86WV6 379 aaPredicted RBP11.03□□□□□ -0.64
LINC01090-202ENST00000434418 LILRA2Q8N149 483 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 SLC39A11Q8N1S5 342 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 LIN37Q96GY3 246 aaPredicted RBP11.03□□□□□ -0.64
LINC01090-202ENST00000434418 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 RPGRIP1Q96KN7 1286 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 CCDC113Q9H0I3 377 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 LZTS1Q9Y250 596 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 COL4A3BPQ9Y5P4 624 aa11.03□□□□□ -0.64
LINC01090-202ENST00000434418 AGRPO00253 132 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 JAK2O60674 1132 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 SRGAP2CP0DJJ0 459 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 YWHABP31946 246 aaKnown RBP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 KRT2P35908 639 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 ANAPC15P60006 121 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 SPIRE1Q08AE8 756 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 LAPTM5Q13571 262 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 KCNC3Q14003 757 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 EMC2Q15006 297 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 ANKRD1Q15327 319 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 CYP2R1Q6VVX0 501 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 PRPF31Q8WWY3 499 aaKnown RBP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 AUTS2Q8WXX7 1259 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 WASF1Q92558 559 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 GTF3C6Q969F1 213 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 SRPK1Q96SB4 655 aaKnown RBP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 CDCA3Q99618 268 aaPredicted RBP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 MINDY3Q9H8M7 445 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 ARHGEF4Q9NR80 690 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 CHST12Q9NRB3 414 aa11.02□□□□□ -0.65
LINC01090-202ENST00000434418 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC01090-202ENST00000434418 LOC730098B7Z3J9 87 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 TBX3O15119 743 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 B4GALT3O60512 393 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 CAPNS1P04632 268 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 SNRPB2P08579 225 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 SRGAP2BP0DMP2 458 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 ECI1P42126 302 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 ALDH7A1P49419 539 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 CDC42EP1Q00587 391 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 RNASELQ05823 741 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 LAMTOR4Q0VGL1 99 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 SMC1AQ14683 1233 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 CBX2Q14781 532 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 EPHA7Q15375 998 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 HERC4Q5GLZ8 1057 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 ANKRD54Q6NXT1 300 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 SYCE2Q6PIF2 218 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 GLB1LQ6UWU2 654 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 CPNE8Q86YQ8 564 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 TPH2Q8IWU9 490 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 NSUN7Q8NE18 718 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 PSPC1Q8WXF1 523 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 NAP1L4Q99733 375 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 JPH2Q9BR39 696 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 PHF7Q9BWX1 381 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 INO80BQ9C086 356 aaPredicted RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 OSBPL2Q9H1P3 480 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 DHX33Q9H6R0 707 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 NGRNQ9NPE2 291 aaKnown RBP11.01□□□□□ -0.65
LINC01090-202ENST00000434418 AGPAT5Q9NUQ2 364 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 TBC1D13Q9NVG8 400 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 IMPACTQ9P2X3 320 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 DNAJB4Q9UDY4 337 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 PCDHB2Q9Y5E7 798 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 HCFC2Q9Y5Z7 792 aa11.01□□□□□ -0.65
LINC01090-202ENST00000434418 A0A087WWV3 80 aa11□□□□□ -0.65
LINC01090-202ENST00000434418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11□□□□□ -0.65
LINC01090-202ENST00000434418 FSD2A1L4K1 749 aa11□□□□□ -0.65
LINC01090-202ENST00000434418 BTBD18B2RXH4 712 aa11□□□□□ -0.65
LINC01090-202ENST00000434418 DKC1O60832 514 aaKnown RBP eCLIP11□□□□□ -0.65
LINC01090-202ENST00000434418 OFD1O75665 1012 aa11□□□□□ -0.65
LINC01090-202ENST00000434418 BAG4O95429 457 aaKnown RBP11□□□□□ -0.65
LINC01090-202ENST00000434418 PLS3P13797 630 aa11□□□□□ -0.65
LINC01090-202ENST00000434418 NEK4P51957 841 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms