RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 DIS3LQ8TF46 1054 aaKnown RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 TSR2Q969E8 191 aaKnown RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 CLIP3Q96DZ5 547 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 MARS2Q96GW9 593 aaKnown RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 PACSIN1Q9BY11 444 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 REXO4Q9GZR2 422 aaKnown RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 TAF1DQ9H5J8 278 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 MYH16Q9H6N6 1097 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 CWC25Q9NXE8 425 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-213ENST00000433709 ABCF2Q9UG63 623 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 USP25Q9UHP3 1055 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 HS3ST3A1Q9Y663 406 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 NUP98P52948 1817 aa6.84□□□□□ -1.31
HDAC9-213ENST00000433709 ABCC12Q96J65 1359 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 A0A1B0GTW7 788 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 TSPAN6O43657 245 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 PCCAP05165 728 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-213ENST00000433709 ELANEP08246 267 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 MYBP10242 640 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 PRELPP51888 382 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 RPS8P62241 208 aaKnown RBP6.83□□□□□ -1.32
HDAC9-213ENST00000433709 SLFN5Q08AF3 891 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 GTF2H3Q13889 308 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 PROSER3Q2NL68 480 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 TWISTNBQ3B726 338 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-213ENST00000433709 CCDC157Q569K6 752 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 FAM102BQ5T8I3 360 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 LCE5AQ5TCM9 118 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 KSR2Q6VAB6 950 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 LRRC55Q6ZSA7 311 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 DNAJC5GQ8N7S2 189 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 HAS1Q92839 578 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 C1GALT1C1Q96EU7 318 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 CGRRF1Q99675 332 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 C1orf43Q9BWL3 253 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 KMT5AQ9NQR1 393 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 LMBRD1Q9NUN5 540 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 JKAMPQ9P055 326 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 NR2E3Q9Y5X4 410 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 FPGT-TNNI3KV9GXZ4 949 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 TIAM2Q8IVF5 1701 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 DICER1Q9UPY3 1922 aaKnown RBP6.83□□□□□ -1.32
HDAC9-213ENST00000433709 SCN4AP35499 1836 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 SLX4Q8IY92 1834 aa6.83□□□□□ -1.32
HDAC9-213ENST00000433709 ABCC4O15439 1325 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 COL11A2P13942 1736 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-213ENST00000433709 GAGE12BA1L429 117 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 GAGE12HA6NDE8 117 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 LPXNO60711 386 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 ANXA1P04083 346 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 SPATA31D3P0C874 917 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 LAG3P18627 525 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 FGFR4P22455 802 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 RPS12P25398 132 aaKnown RBP6.82□□□□□ -1.32
HDAC9-213ENST00000433709 OCA2Q04671 838 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 BEAN1Q3B7T3 259 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 CXorf57Q6NSI4 855 aaKnown RBP6.82□□□□□ -1.32
HDAC9-213ENST00000433709 SPATA31D4Q6ZUB0 917 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 MRGPREQ86SM8 312 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 MAPKAPK5Q8IW41 473 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 CAMKK1Q8N5S9 505 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 PPP1R35Q8TAP8 253 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 TAAR9Q96RI9 348 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 ACO2Q99798 780 aaKnown RBP6.82□□□□□ -1.32
HDAC9-213ENST00000433709 RNPEPQ9H4A4 650 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 ADARB2Q9NS39 739 aaKnown RBP6.82□□□□□ -1.32
HDAC9-213ENST00000433709 FZD1Q9UP38 647 aa6.82□□□□□ -1.32
HDAC9-213ENST00000433709 H3BUI4 141 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 ARIH2O95376 493 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 CFIP05156 583 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 FCER1AP12319 257 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 TYRP14679 529 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 PRDX5P30044 214 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 PHKA1P46020 1223 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 HSD11B2P80365 405 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 TIGD2Q4W5G0 525 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 B3GNTL1Q67FW5 361 aaPredicted RBP6.81□□□□□ -1.32
HDAC9-213ENST00000433709 ZNF365Q70YC5 407 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 RHOUQ7L0Q8 258 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 FAM90A1Q86YD7 464 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 ANKRD18AQ8IVF6 992 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 TCEAL8Q8IYN2 117 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 TMEM132CQ8N3T6 1108 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 CPEB3Q8NE35 698 aaKnown RBP6.81□□□□□ -1.32
HDAC9-213ENST00000433709 NUP133Q8WUM0 1156 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 LENG9Q96B70 501 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 MYEOVQ96EZ4 313 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 KLHL32Q96NJ5 620 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 MYD88Q99836 296 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 MLST8Q9BVC4 326 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 TLR10Q9BXR5 811 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 SLAMF7Q9NQ25 335 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 SIDT1Q9NXL6 827 aaKnown RBP6.81□□□□□ -1.32
HDAC9-213ENST00000433709 HSFX1Q9UBD0 423 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 PCDHA1Q9Y5I3 950 aa6.81□□□□□ -1.32
HDAC9-213ENST00000433709 CENPVL1A0A0U1RR11 272 aa6.8□□□□□ -1.32
HDAC9-213ENST00000433709 PRSS29PA6NIE9 313 aa6.8□□□□□ -1.32
HDAC9-213ENST00000433709 TMEM200CA6NKL6 621 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms