RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 MTCL1Q9Y4B5 1905 aaKnown RBP16.23■□□□□ 0.19
CNOT9-205ENST00000433439 PTPRDP23468 1912 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 CCDC195A0A1B0GUA6 201 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 TULP2O00295 520 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 PIK3R2O00459 728 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 TBX10O75333 385 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 CDR2Q01850 454 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
CNOT9-205ENST00000433439 PLD1Q13393 1074 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 CLUL1Q15846 466 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 ANKRD54Q6NXT1 300 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 ELMOD1Q8N336 334 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 TC2NQ8N9U0 490 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 ZMIZ2Q8NF64 920 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 FEZF2Q8TBJ5 459 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 HDAC7Q8WUI4 952 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 DDX1Q92499 740 aaKnown RBP16.22■□□□□ 0.19
CNOT9-205ENST00000433439 SYN2Q92777 582 aaPredicted RBP16.22■□□□□ 0.19
CNOT9-205ENST00000433439 C8orf48Q96LL4 319 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNOT9-205ENST00000433439 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 ST7Q9NRC1 585 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 HSFX1Q9UBD0 423 aa16.22■□□□□ 0.19
CNOT9-205ENST00000433439 SLC38A8A6NNN8 435 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 NCK2O43639 380 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 C1RP00736 705 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 SERPING1P05155 500 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 PLEKP08567 350 aaPredicted RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 SETSIPP0DME0 302 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 CHRNB2P17787 502 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 PRKCIP41743 596 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 FMO1Q01740 532 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 SMYD5Q6GMV2 418 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 ZNF571Q7Z3V5 609 aaPredicted RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 PIGZQ86VD9 579 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 ZNF677Q86XU0 584 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 C1orf131Q8NDD1 294 aaKnown RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 SMG7Q92540 1137 aaKnown RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 PABPC5Q96DU9 382 aaKnown RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 ZNF512Q96ME7 567 aaPredicted RBP16.21■□□□□ 0.19
CNOT9-205ENST00000433439 DNAJC7Q99615 494 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 IMPACTQ9P2X3 320 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 PCDHGC3Q9UN70 934 aa16.21■□□□□ 0.19
CNOT9-205ENST00000433439 XPO1O14980 1071 aaKnown RBP16.2■□□□□ 0.18
CNOT9-205ENST00000433439 XYLBO75191 536 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 HNRNPA1P09651 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
CNOT9-205ENST00000433439 LCP1P13796 627 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 GPD2P43304 727 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 PKDCCQ504Y2 493 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 NAA35Q5VZE5 725 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 TMEM184AQ6ZMB5 413 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 DENND5BQ6ZUT9 1274 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 GPRIN1Q7Z2K8 1008 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 DNAJB7Q7Z6W7 309 aaPredicted RBP16.2■□□□□ 0.18
CNOT9-205ENST00000433439 NUP93Q8N1F7 819 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 TMEM35BQ8NCS4 154 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 PCDHB18PQ96TA0 734 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CORO1BQ9BR76 489 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 PRKD2Q9BZL6 878 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 DEF6Q9H4E7 631 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 LRRC4Q9HBW1 653 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CSNK1G1Q9HCP0 422 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 HCFC1R1Q9NWW0 138 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CLEC1BQ9P126 229 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 CDH22Q9UJ99 828 aa16.2■□□□□ 0.18
CNOT9-205ENST00000433439 BZW2Q9Y6E2 419 aaKnown RBP16.2■□□□□ 0.18
CNOT9-205ENST00000433439 TMCO5BA8MYB1 307 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 H3BQ06 376 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-205ENST00000433439 CSH1P0DML2 217 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 CSH2P0DML3 217 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 MYL4P12829 197 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 KCNA5P22460 613 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 LTBRP36941 435 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 EIF4A3P38919 411 aaKnown RBP16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SLC5A3P53794 718 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 CTC1Q2NKJ3 1217 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 HGSNATQ68CP4 663 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 PMF1Q6P1K2 205 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SYCE2Q6PIF2 218 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 WDR59Q6PJI9 974 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 GRASPQ7Z6J2 395 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-205ENST00000433439 ITIH5Q86UX2 942 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 VPS36Q86VN1 386 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 HS6ST3Q8IZP7 471 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 WDTC1Q8N5D0 677 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 MAFAQ8NHW3 353 aaPredicted RBP16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SCAMP5Q8TAC9 235 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SLC35F5Q8WV83 523 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SPATA17Q96L03 361 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 CHP1Q99653 195 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 LHX5Q9H2C1 402 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 SYNCQ9H7C4 482 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 ARHGAP20Q9P2F6 1191 aa16.19■□□□□ 0.18
CNOT9-205ENST00000433439 HHLA1C9JL84 531 aa16.18■□□□□ 0.18
CNOT9-205ENST00000433439 PTMAP06454 111 aaKnown RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms