RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 CNBD2Q96M20 576 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 SENP7Q9BQF6 1050 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PLIN4Q96Q06 1357 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 KBTBD13C9JR72 458 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PDLIM1O00151 329 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 SUPT3HO75486 399 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 RGS2P41220 211 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 OTUD4Q01804 1114 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MYBPC2Q14324 1141 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 ACAP1Q15027 740 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 CEP55Q53EZ4 464 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 FBXL19Q6PCT2 694 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 B3GNT6Q6ZMB0 384 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 LARGE2Q8N3Y3 721 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 FAM71DQ8N9W8 422 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MZB1Q8WU39 189 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 DCAF4Q8WV16 495 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MMP19Q99542 508 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 WDR83Q9BRX9 315 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 TMOD2Q9NZR1 351 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 LZTS1Q9Y250 596 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MYH14Q7Z406 1995 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 SMIM31A0A1B0GVY4 71 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 WEE2P0C1S8 567 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PMLP29590 882 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 GPC3P51654 580 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 ATXN3P54252 364 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 SOX10P56693 466 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 HPCAP84074 193 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 ZNF394Q53GI3 561 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 CIAPIN1Q6FI81 312 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 KLHDC10Q6PID8 442 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 C1orf228Q6PIY5 440 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 MON1BQ7L1V2 547 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 FAM163AQ96GL9 167 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 CCDC28BQ9BUN5 200 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 STRA6Q9BX79 667 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDH9Q9HC56 1237 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 TDRKHQ9Y2W6 561 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 A0A0J9YVX5 310 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 TCRBV9S1A1TA0A576 114 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 TMEM63AO94886 807 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 GNA15P30679 374 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 ATG16L1Q676U5 607 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 HPS6Q86YV9 775 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 C20orf27Q9GZN8 174 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDHGB4Q9UN71 923 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDHGB5Q9Y5G0 923 aa12.05□□□□□ -0.48
HMGCS1-202ENST00000433297 PHLPP1O60346 1717 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 GAKO14976 1311 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 CST8O60676 142 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 TOP3BO95985 862 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 PRPF18Q99633 342 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 WDR11Q9BZH6 1224 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 GPAMQ9HCL2 828 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 KCND2Q9NZV8 630 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 NARFQ9UHQ1 456 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 INPP5FQ9Y2H2 1132 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 POLR2MP0CAP2 368 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 HSPA2P54652 639 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 PTP4A2Q12974 167 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 CYLC2Q14093 348 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 SMAD1Q15797 465 aaKnown RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 ANKRD20A4Q4UJ75 823 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 TFDP3Q5H9I0 405 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 PLA2G4FQ68DD2 849 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 CHSY1Q86X52 802 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 IFT122Q9HBG6 1241 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 POLLQ9UGP5 575 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 IP6K2Q9UHH9 426 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 ZNF335Q9H4Z2 1342 aaPredicted RBP12.04□□□□□ -0.48
HMGCS1-202ENST00000433297 TTC36A6NLP5 189 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 VILLO15195 856 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 ADCY3O60266 1144 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 STIP1P31948 543 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 OASLQ15646 514 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CDC42EP5Q6NZY7 148 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 KLC3Q6P597 504 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 UNC45BQ8IWX7 931 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 CCDC106Q9BWC9 280 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 DTNAQ9Y4J8 743 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 GOLGB1Q14789 3259 aaKnown RBP12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 G3V3G9 751 aa12.03□□□□□ -0.48
HMGCS1-202ENST00000433297 COQ9O75208 318 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms