RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RIPK3Q9Y572 518 aa15.72■□□□□ 0.11
LINC00839-202ENST00000429940 DNAJC6O75061 913 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 RGS20O76081 388 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 ASS1P00966 412 aaKnown RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 NAMPTP43490 491 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CDK16Q00536 496 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 MAP3K10Q02779 954 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 SLC25A11Q02978 314 aaKnown RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 VPS52Q8N1B4 723 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CFAP61Q8NHU2 1237 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 MCUR1Q96AQ8 359 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 SKA1Q96BD8 255 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 ZNF333Q96JL9 665 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CYTH2Q99418 400 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 RPAP3Q9H6T3 665 aaPredicted RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CISHQ9NSE2 258 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CHMP2BQ9UQN3 213 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 ADGRA2Q96PE1 1338 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 IQANK1A0A1B0GTG1 560 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 ENO4A6NNW6 628 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 EDN1P05305 212 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 KRT7P08729 469 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 EPHX2P34913 555 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 RFC1P35251 1148 aaPredicted RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 BASP1P80723 227 aaKnown RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 PTK7Q13308 1070 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 KPNB1Q14974 876 aaKnown RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 BBS12Q6ZW61 710 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 CHSY1Q86X52 802 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 UNC45BQ8IWX7 931 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 TTC17Q96AE7 1141 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 PRR11Q96HE9 360 aaPredicted RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 APOPT1Q96IL0 206 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 PORCNQ9H237 461 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 KCNK13Q9HB14 408 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 SPATS2LQ9NUQ6 558 aaKnown RBP15.71■□□□□ 0.11
LINC00839-202ENST00000429940 IKBKGQ9Y6K9 419 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 SIP14410 1827 aa15.71■□□□□ 0.11
LINC00839-202ENST00000429940 VWA5AO00534 786 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 KRT36O76013 467 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 TGDSO95455 350 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 TSHRP16473 764 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 IL1R2P27930 398 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 SATB1Q01826 763 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 PRKD1Q15139 912 aaPredicted RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 ACSBG2Q5FVE4 666 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 CCDC62Q6P9F0 684 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 RINLQ6ZS11 566 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 SERAC1Q96JX3 654 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 FAM111AQ96PZ2 611 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 KIF3CO14782 793 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 LRCH4O75427 683 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 DLDP09622 509 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 DHRS4L1P0CG22 281 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 ESRRAP11474 423 aaPredicted RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 BGNP21810 368 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 EIF4BP23588 611 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 KDELR1P24390 212 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 TUBP50607 506 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 NEK3P51956 506 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 MYL6P60660 151 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 MXRA7P84157 204 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 MTMR2Q13614 643 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 LBRQ14739 615 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 HADHQ16836 314 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 SNX30Q5VWJ9 437 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 TMEM154Q6P9G4 183 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 APOBEC3FQ8IUX4 373 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 SCYL3Q8IZE3 742 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 FAM71DQ8N9W8 422 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 NSUN6Q8TEA1 469 aaKnown RBP15.7■□□□□ 0.1
LINC00839-202ENST00000429940 TFAP2BQ92481 460 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 ATG4CQ96DT6 458 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 STRIP2Q9ULQ0 834 aa15.7■□□□□ 0.1
LINC00839-202ENST00000429940 C2orf71A6NGG8 1288 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SMAPO00193 183 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 CD48P09326 243 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SUPT20HL2P0C7V6 817 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 KRT3P12035 628 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 CALRP27797 417 aaKnown RBP15.69■□□□□ 0.1
LINC00839-202ENST00000429940 CDH5P33151 784 aaPredicted RBP15.69■□□□□ 0.1
LINC00839-202ENST00000429940 ELK3P41970 407 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 ETV4P43268 484 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 KRT72Q14CN4 511 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SUPT20HL1Q3ZLR7 823 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 IGDCC3Q8IVU1 814 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 THNSL1Q8IYQ7 743 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 ARFGAP1Q8N6T3 406 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 ZNF526Q8TF50 670 aaPredicted RBP15.69■□□□□ 0.1
LINC00839-202ENST00000429940 STMN2Q93045 179 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SYT15Q9BQS2 421 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 MTMR12Q9C0I1 747 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 NIF3L1Q9GZT8 377 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SPDYE5A6NIY4 337 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 SIGLEC16A6NMB1 481 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 CAPN9O14815 690 aa15.69■□□□□ 0.1
LINC00839-202ENST00000429940 PSMG1O95456 288 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms