RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 MARCH8Q5T0T0 291 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 LRRC34Q8IZ02 419 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 MAML3Q96JK9 1138 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 PARK7Q99497 189 aaKnown RBP14.35□□□□□ -0.11
THBS3-202ENST00000428962 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 UBN1Q9NPG3 1134 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 SLC5A4Q9NY91 659 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 TSPAN16Q9UKR8 245 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 NAALADL1Q9UQQ1 740 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 CITO14578 2027 aa14.35□□□□□ -0.11
THBS3-202ENST00000428962 ALOX15BO15296 676 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 NPTXRO95502 500 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 PHBP35232 272 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 CTCFP49711 727 aaPredicted RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 ARL4CP56559 192 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 ACTN3Q08043 901 aaPredicted RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 MKRN3Q13064 507 aaKnown RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 ACVR2BQ13705 512 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 TFDP2Q14188 446 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 HIF1AQ16665 826 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 GOLGA7BQ2TAP0 167 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 OR6B2Q6IFH4 312 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 SLC27A1Q6PCB7 646 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 DPH6Q7L8W6 267 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 PLEKHH3Q7Z736 793 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 PIGWQ7Z7B1 504 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 TAX1BP1Q86VP1 789 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 UBA3Q8TBC4 463 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 HSPH1Q92598 858 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 MAK16Q9BXY0 300 aaKnown RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 DNAI2Q9GZS0 605 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 ZNF408Q9H9D4 720 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 EURLQ9NYK6 297 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 SENP1Q9P0U3 644 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 CAPN7Q9Y6W3 813 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 C2CD4BA6NLJ0 364 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 DPYSL4O14531 572 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 GHRP10912 638 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 FKBP1BP68106 108 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 RASA2Q15283 850 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 TMED2Q15363 201 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 CCDC142Q17RM4 750 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 FAM110CQ1W6H9 321 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 NOTUMQ6P988 496 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 MAP7D3Q8IWC1 876 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 SRRM1Q8IYB3 904 aaKnown RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 ZBED8Q8IZ13 594 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 LRRC52Q8N7C0 313 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 MGARPQ8TDB4 240 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 BRI3BPQ8WY22 251 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 SNX27Q96L92 541 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 CALN1Q9BXU9 219 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 VPS37BQ9H9H4 285 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.34□□□□□ -0.11
THBS3-202ENST00000428962 ZNF236Q9UL36 1845 aa14.34□□□□□ -0.11
THBS3-202ENST00000428962 RASA4BC9J798 803 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 E5RJQ4 531 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 RASA4O43374 803 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 PRPSAP2O60256 369 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 PDGFRAP16234 1089 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 STX2P32856 288 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 PDIA2Q13087 525 aaKnown RBP14.33□□□□□ -0.12
THBS3-202ENST00000428962 IRF5Q13568 498 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 PDK2Q15119 407 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.12
THBS3-202ENST00000428962 CATSPER4Q7RTX7 472 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 ZDHHC17Q8IUH5 632 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 ANKRD42Q8N9B4 389 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 ATP11CQ8NB49 1132 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 RXFP2Q8WXD0 754 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 ADAMTS10Q9H324 1103 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 GBA2Q9HCG7 927 aaPredicted RBP14.33□□□□□ -0.12
THBS3-202ENST00000428962 TMEM51Q9NW97 253 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 HESX1Q9UBX0 185 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 FETUBQ9UGM5 382 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 TBK1Q9UHD2 729 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 SLC24A2Q9UI40 661 aa14.33□□□□□ -0.12
THBS3-202ENST00000428962 TSHRP16473 764 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 CDH6P55285 790 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 ROR1Q01973 937 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 LRRC14Q15048 493 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 KIZQ2M2Z5 673 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 ANKRD20A8PQ5CZ79 823 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 UNC93AQ86WB7 457 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 VSIG1Q86XK7 387 aa14.32□□□□□ -0.12
THBS3-202ENST00000428962 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
THBS3-202ENST00000428962 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms