RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 C17orf75Q9HAS0 396 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 KMT5AQ9NQR1 393 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 OLFML3Q9NRN5 406 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 IGSF5Q9NSI5 407 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PARP2Q9UGN5 583 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 TNFSF13BQ9Y275 285 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 PCDHGA5Q9Y5G8 931 aa9.31□□□□□ -0.92
HDAC1-202ENST00000428704 MTCL1Q9Y4B5 1905 aaKnown RBP9.31□□□□□ -0.92
HDAC1-202ENST00000428704 FREM2Q5SZK8 3169 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 SOWAHDA6NJG2 315 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PDXKO00764 312 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 XYLBO75191 536 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PAPSS2O95340 614 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 CSRP1P21291 193 aaKnown RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ZNF131P52739 623 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 NCKAP1LP55160 1127 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 DSG1Q02413 1049 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 GAS6Q14393 721 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 DCAF4L1Q3SXM0 396 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PPM1LQ5SGD2 360 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 LILRA6Q6PI73 481 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ZNF397Q8NF99 534 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 TMEM174Q8WUU8 243 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 SCFD1Q8WVM8 642 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ING5Q8WYH8 240 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ZNF592Q92610 1267 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 RABGGTAQ92696 567 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 KCNN1Q92952 543 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 HPS3Q969F9 1004 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 FIZ1Q96SL8 496 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ADPGKQ9BRR6 497 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PLA2G2FQ9BZM2 168 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 HAPLN2Q9GZV7 340 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PDCL3Q9H2J4 239 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 CACNA2D2Q9NY47 1150 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 SEL1LQ9UBV2 794 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 KLK13Q9UKR3 277 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 ODF2LQ9ULJ1 636 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 SIK3Q9Y2K2 1263 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 EPN1Q9Y6I3 576 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-202ENST00000428704 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
HDAC1-202ENST00000428704 TSC2P49815 1807 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CASTOR2A6NHX0 329 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 EIF3DO15371 548 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CCL16O15467 120 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 RPP40O75818 363 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 KIF4AO95239 1232 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 NDUFA10O95299 355 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CHRNB1P11230 501 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 RPL17P18621 184 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 IGFBP6P24592 240 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 GRM5P41594 1212 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 TUBB4BP68371 445 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 KRT83P78385 493 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CREMQ03060 361 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 TUSC3Q13454 348 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 LRRC32Q14392 662 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 GRM2Q14416 872 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 MTF1Q14872 753 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 ZNF568Q3ZCX4 644 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 XKR4Q5GH76 650 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 GLRA4Q5JXX5 417 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 WDR59Q6PJI9 974 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 KBTBD6Q86V97 674 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CREBRFQ8IUR6 639 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 TRIM59Q8IWR1 403 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 GAB3Q8WWW8 586 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 SYN2Q92777 582 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 MCRS1Q96EZ8 462 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 ZBTB45Q96K62 511 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 B3GALT6Q96L58 329 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 PPP1R10Q96QC0 940 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 MRPL4Q9BYD3 311 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 GPR62Q9BZJ7 368 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 NUCKS1Q9H1E3 243 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 HAUS4Q9H6D7 363 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 MRPL44Q9H9J2 332 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 CHST7Q9NS84 486 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 ZNHIT6Q9NWK9 470 aaKnown RBP9.29□□□□□ -0.92
HDAC1-202ENST00000428704 DNAI1Q9UI46 699 aa9.29□□□□□ -0.92
HDAC1-202ENST00000428704 EIF3CLB5ME19 914 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CETN3O15182 167 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CALUO43852 315 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 TOM1L1O75674 476 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 LCA5LO95447 670 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 KRT18P05783 430 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 C8AP07357 584 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 MCF2P10911 925 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 TRIM21P19474 475 aaKnown RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CASQ1P31415 396 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 CYLC1P35663 651 aaPredicted RBP9.28□□□□□ -0.92
HDAC1-202ENST00000428704 OSTNP61366 133 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 GNG11P61952 73 aa9.28□□□□□ -0.92
HDAC1-202ENST00000428704 SOX4Q06945 474 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms