RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PDCL3Q9H2J4 239 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 PLCB1Q9NQ66 1216 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 TMEM30AQ9NV96 361 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 TSPAN16Q9UKR8 245 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 SIK3Q9Y2K2 1263 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 ARID5AQ03989 594 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 PTK2Q05397 1052 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 NR1I3Q14994 352 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 TEAD2Q15562 447 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 DENND5BQ6ZUT9 1274 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 ADHFE1Q8IWW8 467 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 NUP93Q8N1F7 819 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 SPATA17Q96L03 361 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 DUSP16Q9BY84 665 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 STK33Q9BYT3 514 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.41■□□□□ 0.06
SGCE-204ENST00000428696 LIMD1Q9UGP4 676 aa15.41■□□□□ 0.06
SGCE-204ENST00000428696 A0A1B0GTH6 734 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 FAM170AA1A519 330 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 C2CD4DB7Z1M9 353 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 M0QYV0 167 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 EPHB6O15197 1021 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 MED7O43513 233 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 GFPT2O94808 682 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 NOL4O94818 638 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 MICAL2O94851 1124 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 FGF19O95750 216 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 TPM3P06753 285 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 POU2F2P09086 479 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 NPR3P17342 541 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 CEBPBP17676 345 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 YWHAQP27348 245 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 KRT9P35527 623 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 CCR2P41597 374 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 USP46P62068 366 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 CYP4F8P98187 520 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 CNGA2Q16280 664 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 ARHGAP15Q53QZ3 475 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 ARHGAP17Q68EM7 881 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 ANKRD52Q8NB46 1076 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 LEMD2Q8NC56 503 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 SCAMP5Q8TAC9 235 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 SHC3Q92529 594 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 FGF13Q92913 245 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 ERGIC2Q96RQ1 377 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 MYADMQ96S97 322 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 UHRF1Q96T88 793 aaPredicted RBP15.4■□□□□ 0.06
SGCE-204ENST00000428696 RBSNQ9H1K0 784 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 GANQ9H2C0 597 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 TRPC7Q9HCX4 862 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 EHD2Q9NZN4 543 aa15.4■□□□□ 0.06
SGCE-204ENST00000428696 CHORDC1Q9UHD1 332 aaPredicted RBP15.4■□□□□ 0.06
SGCE-204ENST00000428696 A0A0C4DFX4 3053 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 MTCL1Q9Y4B5 1905 aaKnown RBP15.39■□□□□ 0.05
SGCE-204ENST00000428696 O00370 1275 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 PIK3R2O00459 728 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 HMGA1P17096 107 aaKnown RBP15.39■□□□□ 0.05
SGCE-204ENST00000428696 RFX1P22670 979 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 CDC25CP30307 473 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 RGS7P49802 495 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 PDE4CQ08493 712 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 GPR158Q5T848 1215 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 DPY19L2P1Q6NXN4 242 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 CLEC20AQ6ZU45 233 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 SLC47A2Q86VL8 602 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 TMC8Q8IU68 726 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 PASD1Q8IV76 773 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 SHKBP1Q8TBC3 707 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 CPLX3Q8WVH0 158 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 FBXO32Q969P5 355 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 UXTQ9UBK9 157 aaPredicted RBP15.39■□□□□ 0.05
SGCE-204ENST00000428696 CDH7Q9ULB5 785 aa15.39■□□□□ 0.05
SGCE-204ENST00000428696 CBFA2T2O43439 604 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 RTN3O95197 1032 aaPredicted RBP15.38■□□□□ 0.05
SGCE-204ENST00000428696 STAT1P42224 750 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ZNF132P52740 706 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 SLC5A3P53794 718 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 BCAT1P54687 386 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 BPIFB4P59827 614 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ZP2Q05996 745 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 TAF10Q12962 218 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 STXBP5Q5T5C0 1151 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 DENND1BQ6P3S1 775 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 LCLAT1Q6UWP7 414 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 GAREM2Q75VX8 874 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 TTC30AQ86WT1 665 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 GJD3Q8N144 294 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ZMIZ2Q8NF64 920 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ZNF606Q8WXB4 792 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 MRPS31Q92665 395 aaKnown RBP15.38■□□□□ 0.05
SGCE-204ENST00000428696 SLITRK1Q96PX8 696 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ZSWIM1Q9BR11 485 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 NAA15Q9BXJ9 866 aaKnown RBP15.38■□□□□ 0.05
SGCE-204ENST00000428696 LRRC3Q9BY71 257 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 XPO4Q9C0E2 1151 aaKnown RBP15.38■□□□□ 0.05
SGCE-204ENST00000428696 LRRC4Q9HBW1 653 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 ST7Q9NRC1 585 aa15.38■□□□□ 0.05
SGCE-204ENST00000428696 TRPM5Q9NZQ8 1165 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms