RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CYFIP2Q96F07 1278 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 PRIMPOLQ96LW4 560 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ZBTB18Q99592 522 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 TTPALQ9BTX7 342 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 BCO2Q9BYV7 579 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ELOVL4Q9GZR5 314 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ZFP14Q9HCL3 533 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 GPRC5CQ9NQ84 441 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 ELOVL2Q9NXB9 296 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 IP6K2Q9UHH9 426 aa7.56□□□□□ -1.2
CNOT4-206ENST00000428680 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TSPAN3O60637 253 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PRMT3O60678 531 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 OCM2P0CE71 109 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 OCMP0CE72 109 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CHRNA3P32297 505 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DHPSP49366 369 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PEX6Q13608 980 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 SLMAPQ14BN4 828 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PCBP1Q15365 356 aaKnown RBP eCLIP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 KYNUQ16719 465 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 FAM46CQ5VWP2 391 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 UBA3Q8TBC4 463 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MCRS1Q96EZ8 462 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 UROC1Q96N76 676 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TGS1Q96RS0 853 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TMEM117Q9H0C3 514 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DPH5Q9H2P9 285 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 THAP9Q9H5L6 903 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 ZNF576Q9H609 170 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 AGO4Q9HCK5 861 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TXNRD2Q9NNW7 524 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 RWDD2AQ9UIY3 292 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 HYOU1Q9Y4L1 999 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 F5H423 210 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 POC1B-GALNT4F8VUJ3 575 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 NDUFB5O43674 189 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 RECQL4O94761 1208 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 GABRR2P28476 465 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 RGS4P49798 205 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DGKEP52429 567 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MMEL1Q495T6 779 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 FAM124AQ86V42 546 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 FAM126BQ8IXS8 530 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 OSCP1Q8WVF1 389 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 EXO5Q9H790 373 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CBX8Q9HC52 389 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 LNPEPQ9UIQ6 1025 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 KIAA1257Q9ULG3 409 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TBX20Q9UMR3 447 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 NR2E1Q9Y466 385 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 NFATC1O95644 943 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 TCP1P17987 556 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PFKPQ01813 784 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CDR2Q01850 454 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MTA1Q13330 715 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 C10orf76Q5T2E6 689 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 ZC3H14Q6PJT7 736 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 SLC51AQ86UW1 340 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 C4orf19Q8IY42 314 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CCDC170Q8IYT3 715 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PDZD8Q8NEN9 1154 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MFSD14AQ96MC6 490 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 POLR3CQ9BUI4 534 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 GTPBP2Q9BX10 602 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 XPO4Q9C0E2 1151 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 RNPEPQ9H4A4 650 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DMAP1Q9NPF5 467 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CASS4Q9NQ75 786 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DDX41Q9UJV9 622 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 EPN1Q9Y6I3 576 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 LTBP2Q14767 1821 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PSMD12O00232 456 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MAGEC1O60732 1142 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 GRK3P35626 688 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 ATP5C1P36542 298 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 MAP3K7CLP57077 242 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DRAP1Q14919 205 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PCSK7Q16549 785 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 KRT71Q3SY84 523 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 HECTD3Q5T447 861 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 VSIG10LQ86VR7 867 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PPTC7Q8NI37 304 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 CDX2Q99626 313 aaPredicted RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 HAUS4Q9H6D7 363 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 WDR41Q9HAD4 459 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 PARVAQ9NVD7 372 aa7.55□□□□□ -1.2
CNOT4-206ENST00000428680 DDX56Q9NY93 547 aaKnown RBP7.55□□□□□ -1.2
CNOT4-206ENST00000428680 EFCAB8A8MWE9 144 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ACKR2O00590 384 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 FBXO21O94952 628 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 ECEL1O95672 775 aa7.54□□□□□ -1.2
CNOT4-206ENST00000428680 HADHAP40939 763 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms