RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.27
C9orf3-206ENST00000428313 EME1Q96AY2 570 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 RANBP9Q96S59 729 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 NUF2Q9BZD4 464 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 PALMDQ9NP74 551 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 DMAC2Q9NW81 257 aa16.77■□□□□ 0.27
C9orf3-206ENST00000428313 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 KLHL2O95198 593 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 SGPL1O95470 568 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 EIF2S1P05198 315 aaKnown RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 TSHRP16473 764 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 GYG1P46976 350 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 COPAP53621 1224 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 EPHB1P54762 984 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 FMO1Q01740 532 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 KCNA1Q09470 495 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 WASHC5Q12768 1159 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 EFTUD2Q15029 972 aaKnown RBP eCLIP16.76■□□□□ 0.274e-7■■■□□ 18.8
C9orf3-206ENST00000428313 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 HP1BP3Q5SSJ5 553 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 DCLRE1AQ6PJP8 1040 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 AMIGO2Q86SJ2 522 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 ARID3BQ8IVW6 561 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 ZNF34Q8IZ26 560 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 DDHD1Q8NEL9 900 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 TSPAN14Q8NG11 270 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 RAB3IL1Q8TBN0 382 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 CHPT1Q8WUD6 406 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 STARD8Q92502 1023 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 KLF6Q99612 283 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 GPATCH1Q9BRR8 931 aaKnown RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 CDH7Q9ULB5 785 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 DOLKQ9UPQ8 538 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 CDH3P22223 829 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 AQP5P55064 265 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 RPS3AP61247 264 aaKnown RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 TFDP1Q14186 410 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 KCTD21Q4G0X4 260 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 SH2D5Q6ZV89 423 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 FBXW8Q8N3Y1 598 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 ZMAT2Q96NC0 199 aaKnown RBP16.76■□□□□ 0.27
C9orf3-206ENST00000428313 VPS45Q9NRW7 570 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 ANAPC7Q9UJX3 599 aa16.76■□□□□ 0.27
C9orf3-206ENST00000428313 ZNFX1Q9P2E3 1918 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 PSTPIP1O43586 416 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 FAM189A1O60320 539 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 FUCA1P04066 466 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 GLRA2P23416 452 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 CETN1Q12798 172 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 UBAP2LQ14157 1087 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 RALGPS1Q5JS13 557 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 PAOXQ6QHF9 649 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 USP17L2Q6R6M4 530 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 POTEAQ6S8J7 498 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 FAM71AQ8IYT1 594 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 TRIML2Q8N7C3 387 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ATP6V0A1Q93050 837 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 DYNLL2Q96FJ2 89 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ACAP3Q96P50 834 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 HGH1Q9BTY7 390 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 HEMGNQ9BXL5 484 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 STN1Q9H668 368 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 HEMK1Q9Y5R4 338 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 CNOT3O75175 753 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 KRT38O76015 456 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 C8BP07358 591 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ARSEP51690 589 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 TUBA4AP68366 448 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 BST1Q10588 318 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 BFSP1Q12934 665 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 SEPT6Q14141 434 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ADGRE1Q14246 886 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 ANKDD1AQ495B1 522 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 CRLF3Q8IUI8 442 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 CENPSQ8N2Z9 138 aa16.75■□□□□ 0.27
C9orf3-206ENST00000428313 GNEQ9Y223 722 aaKnown RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 CTDP1Q9Y5B0 961 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-206ENST00000428313 SPTLC1O15269 473 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 LIASO43766 372 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 CLASP2O75122 1294 aaKnown RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 FAM155BO75949 473 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 ESRRBO95718 433 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 CAPNS1P04632 268 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 NAT1P18440 290 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 CIITAP33076 1130 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 GPS1Q13098 491 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 ACAP1Q15027 740 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 OASLQ15646 514 aaKnown RBP16.74■□□□□ 0.27
C9orf3-206ENST00000428313 HIF1AQ16665 826 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 TEX44Q53QW1 395 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 CAVIN4Q5BKX8 364 aa16.74■□□□□ 0.27
C9orf3-206ENST00000428313 ACAD10Q6JQN1 1059 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms