RNA–Protein interactions for RNA: ENST00000427737.5

TUBA4A-205, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-205ENST00000427737 NELL1Q92832 810 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 CCDC47Q96A33 483 aaKnown RBP13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 SDCBP2Q9H190 292 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 EBF3Q9H4W6 596 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 HPS4Q9NQG7 708 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 DLL3Q9NYJ7 618 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 GREB1Q4ZG55 1949 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 SPTBN2O15020 2390 aa13.3□□□□□ -0.28
TUBA4A-205ENST00000427737 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 OTOL1A6NHN0 477 aaPredicted RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 CLDN5O00501 218 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 AKAP3O75969 853 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 USP17L7P0C7H9 530 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 TDGF1P13385 188 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ARSAP15289 507 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 NR2F2P24468 414 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 NOP14P78316 857 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 USP4Q13107 963 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 RUNX3Q13761 415 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 LRRC32Q14392 662 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 BECN1Q14457 450 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 KCNB1Q14721 858 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ZNF77Q15935 545 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ZACNQ401N2 412 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 C1orf220Q5T0J3 134 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 CC2D1AQ6P1N0 951 aaPredicted RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 MAMSTRQ6ZN01 415 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 Q6ZS52 159 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 GUF1Q8N442 669 aaKnown RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ARL14EPQ8N8R7 260 aaPredicted RBP13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 CHFRQ96EP1 664 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 TTLL2Q9BWV7 592 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 B3GNT5Q9BYG0 378 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ELOVL4Q9GZR5 314 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ZSCAN32Q9NX65 697 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 PCDHGA2Q9Y5H1 932 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
TUBA4A-205ENST00000427737 IKBKBO14920 756 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 MAPK13O15264 365 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 PIK3CAP42336 1068 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 CCR3P51677 355 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SATB1Q01826 763 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 PNOCQ13519 176 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 CCINQ13939 588 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 MTF1Q14872 753 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 NFIL3Q16649 462 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SMYD4Q8IYR2 804 aaPredicted RBP13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 SUMF1Q8NBK3 374 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 RUBCNQ92622 972 aa13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 ZNF638Q14966 1978 aaKnown RBP13.28□□□□□ -0.28
TUBA4A-205ENST00000427737 LILRB5O75023 590 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 ASS1P00966 412 aaKnown RBP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 HLA-DRAP01903 254 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 TRIM49P0CI25 452 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 TRIM49CP0CI26 452 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 HDCP19113 662 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 ASPAP45381 313 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 VAMP7P51809 220 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 IFRD2Q12894 506 aaPredicted RBP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 ORC1Q13415 861 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 PPP2R5DQ14738 602 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 DGKKQ5KSL6 1271 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 INTS8Q75QN2 995 aaKnown RBP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 FAM35AQ86V20 835 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 FMR1NBQ8N0W7 255 aaPredicted RBP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 SPEM1Q8N4L4 309 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 SH3RF2Q8TEC5 729 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 TNIP3Q96KP6 325 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 KCNK16Q96T55 309 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 C2orf42Q9NWW7 574 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 EHD2Q9NZN4 543 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 TRPM5Q9NZQ8 1165 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 HMGXB4Q9UGU5 601 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 WNT6Q9Y6F9 365 aa13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 HELZP42694 1942 aaKnown RBP13.27□□□□□ -0.29
TUBA4A-205ENST00000427737 ZNF840PA6NDX5 716 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 P4HA1P13674 534 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 CXCL12P48061 93 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 GCLMP48507 274 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 PDE6CP51160 858 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 NDST1P52848 882 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 ZXDBP98169 803 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
TUBA4A-205ENST00000427737 TAF10Q12962 218 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms