RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SOWAHDA6NJG2 315 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CYP7B1O75881 506 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CLTAP09496 248 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CYP2D6P10635 497 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 U2AF2P26368 475 aaKnown RBP eCLIP5.95□□□□□ -1.467e-7■■■□□ 17.1
HERC4-206ENST00000427635 RRM2P31350 389 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 FNTAP49354 379 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EPHB4P54760 987 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 RHOAP61586 193 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 POU4F1Q01851 419 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 COX10Q12887 443 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 BNIP1Q12981 228 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 COASYQ13057 564 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 FAM173BQ6P4H8 233 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 SAMD7Q7Z3H4 446 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 VN1R5Q7Z5H4 357 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CAMK1DQ8IU85 385 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 C8orf48Q96LL4 319 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 FMO2Q99518 471 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 BARD1Q99728 777 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 KCNN2Q9H2S1 579 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 DPP3Q9NY33 737 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CEP72Q9P209 647 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 MAN1B1Q9UKM7 699 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PADI4Q9UM07 663 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EIF3LQ9Y262 564 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 TBC1D3BA6NDS4 549 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CCNB2O95067 398 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 THP07101 528 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ALPPL2P10696 532 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ITGALP20701 1170 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 GRK4P32298 578 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EIF4A3P38919 411 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 NLRP11P59045 1033 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 GPS1Q13098 491 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CYP20A1Q6UW02 462 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 TRMT11Q7Z4G4 463 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 OSBP2Q969R2 916 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ATXN7L3BQ96GX2 97 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 AGAP3Q96P47 875 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 DESI2Q9BSY9 194 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ELOVL2Q9NXB9 296 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PCDHB11Q9Y5F2 797 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 TRAV19A0A0A6YYK7 116 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 FGF19O95750 216 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CHGBP05060 677 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 AKR1A1P14550 325 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TCF7P36402 384 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 LHX1P48742 406 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 GEMP55040 296 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PRKCEQ02156 737 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SNCBQ16143 134 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ATAD3BQ5T9A4 648 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PEX5LQ8IYB4 626 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 IPMKQ8NFU5 416 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SUN3Q8TAQ9 357 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TMEM245Q9H330 911 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 NDST4Q9H3R1 872 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RMND5AQ9H871 391 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZSWIM5Q9P217 1185 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZMAT5Q9UDW3 170 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 ATP7BP35670 1465 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 MAGI2Q86UL8 1455 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 VPS26AO75436 327 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ANXA9O76027 345 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CASP14P31944 242 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RBL2Q08999 1139 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RCN1Q15293 331 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PFKFB3Q16875 520 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 RCOR2Q8IZ40 523 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CENPSQ8N2Z9 138 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TTLL11Q8NHH1 800 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 EFHD2Q96C19 240 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 STAMBPL1Q96FJ0 436 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TBCDQ9BTW9 1192 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 LSG1Q9H089 658 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZCWPW1Q9H0M4 648 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PRELID1Q9Y255 219 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 NUP153P49790 1475 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 C1QTNF3-AMACRE9PGA6 284 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 AGRPO00253 132 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TCEA3O75764 348 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SRP72O76094 671 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 SLFN14P0C7P3 912 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 GSPT1P15170 499 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 SLCO1A2P46721 670 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 XRCC4Q13426 336 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 USP10Q14694 798 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 HLFQ16534 295 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CACHD1Q5VU97 1274 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 DENND6AQ8IWF6 608 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 MAGEC3Q8TD91 643 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 OTUD7AQ8TE49 926 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 CAPSLQ8WWF8 208 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZNF558Q96NG5 402 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TMEM237Q96Q45 408 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 USP28Q96RU2 1077 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 DUSP9Q99956 384 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 PRRG3Q9BZD7 231 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms