RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 PAEPP09466 180 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 ALADP13716 330 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 MFAP3P55082 362 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 SGO2Q562F6 1265 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 POTEHQ6S545 545 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 TMEM150AQ86TG1 271 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 NUP93Q8N1F7 819 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 RBBP8NLQ8NC74 664 aaPredicted RBP26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 VPS16Q9H269 839 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 ZMYM5Q9UJ78 669 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 KIAA1257Q9ULG3 409 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 NUMBLQ9Y6R0 609 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 TADA3O75528 432 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 RTN3O95197 1032 aaPredicted RBP26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 CD19P15391 556 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 NPR3P17342 541 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 CDK11BP21127 795 aaKnown RBP26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 ZNF132P52740 706 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 COPB1P53618 953 aaKnown RBP26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 MAP3K7CLP57077 242 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 USP46P62068 366 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 CYP4F8P98187 520 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 STXBP5Q5T5C0 1151 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 PARM1Q6UWI2 310 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 CLEC20AQ6ZU45 233 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 ZMIZ2Q8NF64 920 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 FGF14Q92915 247 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 ASB16Q96NS5 453 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 SIX2Q9NPC8 291 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 MYH10P35580 1976 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 DENND4CQ5VZ89 1909 aa26.63■■□□□ 1.85
HERPUD2-205ENST00000427455 BECN2A8MW95 431 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 BEST1O76090 585 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 CAVIN2O95810 425 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 VDRP11473 427 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 DDX6P26196 483 aaKnown RBP eCLIP26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 SLC5A3P53794 718 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 APBA1Q02410 837 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 FKBP15Q5T1M5 1219 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 GPR158Q5T848 1215 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 GJB7Q6PEY0 223 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 ZSCAN18Q8TBC5 510 aaPredicted RBP26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 RSAD2Q8WXG1 361 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 MRPS31Q92665 395 aaKnown RBP26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 SMARCD2Q92925 531 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 ZSWIM3Q96MP5 696 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 DUSP16Q9BY84 665 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 PNPLA8Q9NP80 782 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 CNTN6Q9UQ52 1028 aa26.62■■□□□ 1.85
HERPUD2-205ENST00000427455 PI4K2BG5E9Z4 385 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 TNFRSF10BO14763 440 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 TDGQ13569 410 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 FAM78AQ5JUQ0 283 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 SMYD5Q6GMV2 418 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 TASP1Q9H6P5 420 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 TRPV4Q9HBA0 871 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 NUP210Q8TEM1 1887 aaPredicted RBP26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 MYO10Q9HD67 2058 aa26.61■■□□□ 1.85
HERPUD2-205ENST00000427455 ZNF638Q14966 1978 aaKnown RBP26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 LRRC10BA6NIK2 292 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 SOBPA7XYQ1 873 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 LGALS16A8MUM7 142 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 KRT5P13647 590 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 FCARP24071 287 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 KCNMA1Q12791 1236 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 IQCB1Q15051 598 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 GOLGA7BQ2TAP0 167 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 UBALD2Q8IYN6 164 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 ANKRD52Q8NB46 1076 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 SLITRK1Q96PX8 696 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 COMMD8Q9NX08 183 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 TSPAN16Q9UKR8 245 aa26.6■■□□□ 1.85
HERPUD2-205ENST00000427455 RNF225M0QZC1 329 aaPredicted RBP26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 O00370 1275 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ECI2O75521 394 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ATP1A3P13637 1013 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 RFX1P22670 979 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 YWHAQP27348 245 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 PPP3CCP48454 512 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 SLC8A3P57103 927 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 IFRD2Q12894 506 aaPredicted RBP26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ARHGAP44Q17R89 818 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ST13P5Q8NFI4 369 aaPredicted RBP26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 SHC3Q92529 594 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ELSPBP1Q96BH3 223 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 KXD1Q9BQD3 176 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 LSM14BQ9BX40 385 aaKnown RBP26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 ZFP14Q9HCL3 533 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 IL37Q9NZH6 218 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 TRPM5Q9NZQ8 1165 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 HESX1Q9UBX0 185 aa26.59■■□□□ 1.85
HERPUD2-205ENST00000427455 HHLA1C9JL84 531 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 WEE1P30291 646 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 BCAT1P54687 386 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 ZXDAP98168 799 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 TAF10Q12962 218 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 STILQ15468 1287 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 DPY19L2P1Q6NXN4 242 aa26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 APTXQ7Z2E3 356 aaKnown RBP26.58■■□□□ 1.85
HERPUD2-205ENST00000427455 MON1AQ86VX9 555 aa26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms