RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 TTC13Q8NBP0 860 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 EZH1Q92800 747 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ZBTB45Q96K62 511 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 NR1H4Q96RI1 486 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ASCC2Q9H1I8 757 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 DDX56Q9NY93 547 aaKnown RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 KCNG1Q9UIX4 513 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 TYROBPO43914 113 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 LYNP07948 512 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ANPEPP15144 967 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 JAK3P52333 1124 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 PTP4A2Q12974 167 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 TFDP3Q5H9I0 405 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 MIS12Q9H081 205 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 MMADHCQ9H3L0 296 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 DMAP1Q9NPF5 467 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 CALB1P05937 261 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 NCF2P19878 526 aaPredicted RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 MCL1Q07820 350 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ASPHQ12797 758 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 MTMR2Q13614 643 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 EFHC2Q5JST6 749 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 C1orf220Q5T0J3 134 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 RIPOR1Q6ZS17 1223 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 TTC7BQ86TV6 843 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ALYREFQ86V81 257 aaKnown RBP10.69□□□□□ -0.7
CTCFL-206ENST00000426658 MCPH1Q8NEM0 835 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 PPP2R3CQ969Q6 453 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 OPTNQ96CV9 577 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 ATXN7L3BQ96GX2 97 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 HIC2Q96JB3 615 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 SLITRK1Q96PX8 696 aa10.69□□□□□ -0.7
CTCFL-206ENST00000426658 UNGP13051 313 aaPredicted RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 AMPD1P23109 780 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 CCND2P30279 289 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 KLF1Q13351 362 aaPredicted RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 DPP9Q86TI2 863 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ABRAQ8N0Z2 381 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 RNF169Q8NCN4 708 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 E2F7Q96AV8 911 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 HEXIM2Q96MH2 286 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 TIPINQ9BVW5 301 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 NMUR2Q9GZQ4 415 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 HERC5Q9UII4 1024 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 TRIM49D1C9J1S8 452 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ZC3H11AO75152 810 aaKnown RBP eCLIP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ZBED1O96006 694 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 APRTP07741 180 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 EIF3EP60228 445 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 OTUD4Q01804 1114 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 PRKCEQ02156 737 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ZNF699Q32M78 642 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 MMEL1Q495T6 779 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ANGEL2Q5VTE6 544 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ZBTB8OSQ8IWT0 167 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ACTL9Q8TC94 416 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 APOPT1Q96IL0 206 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ECSITQ9BQ95 431 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 TAGLN3Q9UI15 199 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ASB3Q9Y575 518 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 SHANK3Q9BYB0 1731 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 F8VP50 259 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 VIL1P09327 827 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ETS2P15036 469 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 AQP5P55064 265 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 CDH6P55285 790 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 FAAP100Q0VG06 881 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 KRT72Q14CN4 511 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 CHI3L2Q15782 390 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 UGCGQ16739 394 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 PLEKHG4Q58EX7 1191 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 RNASEH2BQ5TBB1 312 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 MAP1SQ66K74 1059 aaPredicted RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 SESTD1Q86VW0 696 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 WDR75Q8IWA0 830 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 LRRN4Q8WUT4 740 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 DDX1Q92499 740 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 PPP1R36Q96LQ0 422 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 ACSS3Q9H6R3 686 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 TLE6Q9H808 572 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 SSU72Q9NP77 194 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 SMYD2Q9NRG4 433 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 IL1RAPL1Q9NZN1 696 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 DRG1Q9Y295 367 aaKnown RBP10.68□□□□□ -0.7
CTCFL-206ENST00000426658 UMODL1Q5DID0 1318 aa10.68□□□□□ -0.7
CTCFL-206ENST00000426658 NR3C2P08235 984 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 RBP3P10745 1247 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 KRT3P12035 628 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
CTCFL-206ENST00000426658 RPL7AP62424 266 aaKnown RBP10.67□□□□□ -0.7
CTCFL-206ENST00000426658 WDR72Q3MJ13 1102 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 OR52E8Q6IFG1 317 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 ISLR2Q6UXK2 745 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 FAM149B1Q96BN6 582 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 NDNQ99608 321 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 RPAP3Q9H6T3 665 aaPredicted RBP10.67□□□□□ -0.7
CTCFL-206ENST00000426658 IFT122Q9HBG6 1241 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 RAB6BQ9NRW1 208 aa10.67□□□□□ -0.7
CTCFL-206ENST00000426658 ZNF70Q9UC06 446 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms