RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MMP19Q99542 508 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 PCSK1NQ9UHG2 260 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 ZMYND8Q9ULU4 1186 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 TMEM191CA6NGB0 347 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 GAS2O43903 313 aaKnown RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 T-ENOLP0DO92 83 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 EDNRBP24530 442 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 MOGSQ13724 837 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 CELF3Q5SZQ8 465 aaKnown RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 NME8Q8N427 588 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 EMC1Q8N766 993 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 CLMNQ96JQ2 1002 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 R3HDMLQ9H3Y0 253 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 KLHL14Q9P2G3 628 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 RABL2BQ9UNT1 228 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 CNTN6Q9UQ52 1028 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 SSC5DA1L4H1 1573 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 B4GALT5O43286 388 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 LSM8O95777 96 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 SLC25A27O95847 323 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 PSMA2P25787 234 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 RAP1GAPP47736 663 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 STAT4Q14765 748 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 RELL1Q8IUW5 271 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 FAM167BQ9BTA0 163 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 MAK16Q9BXY0 300 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CPSF3Q9UKF6 684 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CEP350Q5VT06 3117 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CBX6O95503 412 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CXCL8P10145 99 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF24P17028 368 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 CA4P22748 312 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 MCL1Q07820 350 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 PDIA2Q13087 525 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF449Q6P9G9 518 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 MOB2Q70IA6 237 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 TTC30AQ86WT1 665 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 SLITRK1Q96PX8 696 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 WDR83Q9BRX9 315 aaKnown RBP13.6□□□□□ -0.23
COL12A1-205ENST00000425443 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 SLC5A4Q9NY91 659 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 POLIQ9UNA4 740 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 KAT6AQ92794 2004 aa13.6□□□□□ -0.23
COL12A1-205ENST00000425443 MSS51Q4VC12 460 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 PLEKHG4Q58EX7 1191 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 BZW1Q7L1Q6 419 aaKnown RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF518BQ9C0D4 1074 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 TRABDQ9H4I3 376 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ACKR2O00590 384 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 DNALI1O14645 258 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 MED7O43513 233 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 MAP3K6O95382 1288 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 KRT3P12035 628 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 CDH8P55286 799 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 GPX6P59796 221 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 GRM1Q13255 1194 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ACVR2BQ13705 512 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ACBD5Q5T8D3 534 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 SPOCD1Q6ZMY3 1216 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ERO1BQ86YB8 467 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 PIAS4Q8N2W9 510 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 GBP7Q8N8V2 638 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 LRRN4Q8WUT4 740 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 NOP53Q9NZM5 478 aaKnown RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 STRIP2Q9ULQ0 834 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 EIF4BP23588 611 aaKnown RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF132P52740 706 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 GDF10P55107 478 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 PSMC1P62191 440 aaKnown RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 TAP1Q03518 808 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
COL12A1-205ENST00000425443 AKT3Q9Y243 479 aa13.59□□□□□ -0.23
COL12A1-205ENST00000425443 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.23
COL12A1-205ENST00000425443 A0A1B0GVG6 124 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 CCND1P24385 295 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 SSTR1P30872 391 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ABL2P42684 1182 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 IL9RQ01113 521 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 MKRN3Q13064 507 aaKnown RBP13.58□□□□□ -0.24
COL12A1-205ENST00000425443 HADHQ16836 314 aaKnown RBP13.58□□□□□ -0.24
COL12A1-205ENST00000425443 Q3C1V9 767 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 TFDP3Q5H9I0 405 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ANKRD22Q5VYY1 191 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.24
COL12A1-205ENST00000425443 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 PLPPR4Q7Z2D5 763 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ALLCQ8N6M5 410 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 TXNRD2Q9NNW7 524 aa13.58□□□□□ -0.24
COL12A1-205ENST00000425443 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.24
COL12A1-205ENST00000425443 PPME1Q9Y570 386 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms