RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TNNC2P02585 160 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 IQCF3P0C7M6 154 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 AP3M2P53677 418 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 STAT4Q14765 748 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 TFDP3Q5H9I0 405 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 PARP9Q8IXQ6 854 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 ALLCQ8N6M5 410 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 UBR7Q8N806 425 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.21□□□□□ -0.624e-7■■■□□ 17.6
CUX1-205ENST00000425244 SRRDQ9UH36 339 aa11.21□□□□□ -0.62
CUX1-205ENST00000425244 hCG_1818297A0A087WSY0 165 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 TREHO43280 583 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 DUSP11O75319 330 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 GHRP10912 638 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 KRT15P19012 456 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 RFC1P35251 1148 aaPredicted RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 CDH8P55286 799 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 HIC1Q14526 733 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 FAM47EQ6ZV65 393 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 EXOC8Q8IYI6 725 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 EMC1Q8N766 993 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 C7orf31Q8N865 590 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 CKAP2Q8WWK9 683 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 THOC1Q96FV9 657 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 CFAP57Q96MR6 1250 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 XPNPEP3Q9NQH7 507 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 CPSF3Q9UKF6 684 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 TPX2Q9ULW0 747 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 GAS2O43903 313 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 SUN1O94901 812 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 UBOX5O94941 541 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 CXCL8P10145 99 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 ASPAP45381 313 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 PSEN2P49810 448 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 VCPP55072 806 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 TFDP1Q14186 410 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 PIGHQ14442 188 aaPredicted RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 SNCBQ16143 134 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 PTPN20Q4JDL3 420 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 ATF7IP2Q5U623 682 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 EEF1DP3Q658K8 133 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 TBC1D1Q86TI0 1168 aaPredicted RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 TMEM192Q8IY95 271 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
CUX1-205ENST00000425244 JOSD2Q8TAC2 188 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 CCHCR1Q8TD31 782 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 ANKRD36BP1Q96IX9 119 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 SPC25Q9HBM1 224 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 PCSK1NQ9UHG2 260 aa11.2□□□□□ -0.62
CUX1-205ENST00000425244 MAGEB2O15479 319 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 SEPT4O43236 478 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 TCEA3O75764 348 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 PIAS1O75925 651 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 CYP2C9P11712 490 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 KRT3P12035 628 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 CDKN2BP42772 138 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 PURAQ00577 322 aaKnown RBP11.19□□□□□ -0.62
CUX1-205ENST00000425244 MCL1Q07820 350 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
CUX1-205ENST00000425244 WDR72Q3MJ13 1102 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 SPATA21Q7Z572 469 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 CEP57Q86XR8 500 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 C4orf33Q8N1A6 199 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 CCDC63Q8NA47 563 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 DNAJB3Q8WWF6 145 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 PRDM16Q9HAZ2 1276 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 IFT122Q9HBG6 1241 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 LGALS13Q9UHV8 139 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 TCRBV5S1A1TA0A578 114 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 DNAJC8O75937 253 aaPredicted RBP11.19□□□□□ -0.62
CUX1-205ENST00000425244 HOXD10P28358 340 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 RDXP35241 583 aaKnown RBP11.19□□□□□ -0.62
CUX1-205ENST00000425244 LRRC38Q5VT99 294 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 MPZL3Q6UWV2 235 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 KIAA0319LQ8IZA0 1049 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 BEGAINQ9BUH8 593 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 XYLT2Q9H1B5 865 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 SLC12A4Q9UP95 1085 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 AGAP1Q9UPQ3 857 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 TRIM17Q9Y577 477 aa11.19□□□□□ -0.62
CUX1-205ENST00000425244 FAM47DPA6NHR8 397 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 CST8O60676 142 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 HOXD8P13378 290 aaPredicted RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 EIF4BP23588 611 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 IL1R2P27930 398 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 OTUD4Q01804 1114 aaKnown RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 GAD2Q05329 585 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 XRCC4Q13426 336 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 CDCA2Q69YH5 1023 aaPredicted RBP11.18□□□□□ -0.62
CUX1-205ENST00000425244 CEP128Q6ZU80 1094 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 ACTL9Q8TC94 416 aa11.18□□□□□ -0.62
CUX1-205ENST00000425244 KCNN1Q92952 543 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms