RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CGNQ9P2M7 1197 aaKnown RBP19.73■□□□□ 0.75
SREBF1-206ENST00000423161 NME7Q9Y5B8 376 aa19.73■□□□□ 0.75
SREBF1-206ENST00000423161 SPTBN2O15020 2390 aa19.73■□□□□ 0.75
SREBF1-206ENST00000423161 DNAH14Q0VDD8 3507 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 TRIM66O15016 1216 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 LRP3O75074 770 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 ATG13O75143 517 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 RNF40O75150 1001 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 HDCP19113 662 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 DRD1P21728 446 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 PDE6CP51160 858 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 USP46P62068 366 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 TRPC3Q13507 836 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 KNOP1Q1ED39 458 aaKnown RBP19.72■□□□□ 0.75
SREBF1-206ENST00000423161 NAIF1Q69YI7 327 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-206ENST00000423161 ATL3Q6DD88 541 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 GRAMD1CQ8IYS0 662 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 ZNF516Q92618 1163 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 EXOC4Q96A65 974 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 P2RY13Q9BPV8 354 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 GZF1Q9H116 711 aaPredicted RBP19.72■□□□□ 0.75
SREBF1-206ENST00000423161 FBRSL1Q9HCM7 1045 aaKnown RBP19.72■□□□□ 0.75
SREBF1-206ENST00000423161 TRPM5Q9NZQ8 1165 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 SLC8A2Q9UPR5 921 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.72■□□□□ 0.75
SREBF1-206ENST00000423161 MYOFQ9NZM1 2061 aa19.72■□□□□ 0.75
SREBF1-206ENST00000423161 NCOR2Q9Y618 2525 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 F8VP50 259 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 EXOC3O60645 756 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 FAM163BP0C2L3 166 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 TCF3P15923 654 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 PXNP49023 591 aaPredicted RBP19.71■□□□□ 0.75
SREBF1-206ENST00000423161 GALK1P51570 392 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 ATXN1P54253 815 aaKnown RBP19.71■□□□□ 0.75
SREBF1-206ENST00000423161 MYL6P60660 151 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 PKP1Q13835 747 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 EML3Q32P44 896 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 CEP57L1Q8IYX8 460 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 TTLL2Q9BWV7 592 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 DPEP3Q9H4B8 488 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 EHD2Q9NZN4 543 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 CFAP45Q9UL16 551 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 ARHGAP26Q9UNA1 814 aa19.71■□□□□ 0.75
SREBF1-206ENST00000423161 PHACTR2O75167 634 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 STAU1O95793 577 aaKnown RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 PFKLP17858 780 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 PTPN1P18031 435 aaKnown RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 ATICP31939 592 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 NOP14P78316 857 aaKnown RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 DNM1Q05193 864 aaKnown RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 FBXO43Q4G163 708 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 FAM160A2Q8N612 972 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 CD101Q93033 1021 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 SYAP1Q96A49 352 aaPredicted RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 C8orf48Q96LL4 319 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 ELOVL4Q9GZR5 314 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 XYLT2Q9H1B5 865 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 SEMA4GQ9NTN9 838 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 NXF1Q9UBU9 619 aaKnown RBP19.7■□□□□ 0.74
SREBF1-206ENST00000423161 SERTAD1Q9UHV2 236 aa19.7■□□□□ 0.74
SREBF1-206ENST00000423161 CCDC163A0A0D9SF12 145 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 A8MXQ7 604 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 CLSTN1O94985 981 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 CASP4P49662 377 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 NR1H3Q13133 447 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 BIRC3Q13489 604 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 SPRYD3Q8NCJ5 442 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 GOLGA5Q8TBA6 731 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 PLEKHO2Q8TD55 490 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 RTKNQ9BST9 563 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 ZNF518BQ9C0D4 1074 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 LINC00597Q9H2U6 94 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 EXOC1Q9NV70 894 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 TMEM30AQ9NV96 361 aa19.69■□□□□ 0.74
SREBF1-206ENST00000423161 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
SREBF1-206ENST00000423161 KLRC4O43908 158 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 RPP40O75818 363 aaKnown RBP19.68■□□□□ 0.74
SREBF1-206ENST00000423161 NFATC1O95644 943 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 SLFN14P0C7P3 912 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 PPP3CCP48454 512 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 CACNA2D1P54289 1103 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 CSRP2Q16527 193 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 ZNF699Q32M78 642 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 TDRD10Q5VZ19 366 aaKnown RBP19.68■□□□□ 0.74
SREBF1-206ENST00000423161 PRR23CQ6ZRP0 262 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 B3GALNT2Q8NCR0 500 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 RPLP0P6Q8NHW5 317 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 GAB3Q8WWW8 586 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 EZH1Q92800 747 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-206ENST00000423161 SMYD3Q9H7B4 428 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 POLR3BQ9NW08 1133 aaPredicted RBP19.68■□□□□ 0.74
SREBF1-206ENST00000423161 RCOR1Q9UKL0 485 aa19.68■□□□□ 0.74
SREBF1-206ENST00000423161 ZNF840PA6NDX5 716 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 LRRIQ3A6PVS8 624 aaPredicted RBP19.67■□□□□ 0.74
SREBF1-206ENST00000423161 LEFTY2O00292 366 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 CLDN5O00501 218 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 ABL1P00519 1130 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 CCDC192P0DO97 292 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 ZXDBP98169 803 aa19.67■□□□□ 0.74
SREBF1-206ENST00000423161 IFRD2Q12894 506 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms