RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GNL1P36915 607 aaPredicted RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 PPP3CCP48454 512 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 IFNAR2P48551 515 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 TNNC1P63316 161 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 NOP14P78316 857 aaKnown RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 SRSF5Q13243 272 aaKnown RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 KNOP1Q1ED39 458 aaKnown RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 PKN3Q6P5Z2 889 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 ARL14EPQ8N8R7 260 aaPredicted RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 GOLGA5Q8TBA6 731 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 C8orf48Q96LL4 319 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 P2RY13Q9BPV8 354 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 MRPL45Q9BRJ2 306 aaKnown RBP18.53■□□□□ 0.56
MSH6-203ENST00000420813 CFAP45Q9UL16 551 aa18.53■□□□□ 0.56
MSH6-203ENST00000420813 FOXD2O60548 495 aaPredicted RBP18.52■□□□□ 0.56
MSH6-203ENST00000420813 RNF40O75150 1001 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 EGFP01133 1207 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 CASP1P29466 404 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 GALK1P51570 392 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 ATXN1P54253 815 aaKnown RBP18.52■□□□□ 0.56
MSH6-203ENST00000420813 TRPC3Q13507 836 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 CUL4BQ13620 913 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 EML3Q32P44 896 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 WDR72Q3MJ13 1102 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 MDH1BQ5I0G3 518 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 CEP68Q76N32 757 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 KIAA1958Q8N8K9 716 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 OR6B3Q8NGW1 331 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 SYAP1Q96A49 352 aaPredicted RBP18.52■□□□□ 0.56
MSH6-203ENST00000420813 RTKNQ9BST9 563 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 GZF1Q9H116 711 aaPredicted RBP18.52■□□□□ 0.56
MSH6-203ENST00000420813 SLC39A2Q9NP94 309 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 TRPM5Q9NZQ8 1165 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 SLC8A2Q9UPR5 921 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 NME7Q9Y5B8 376 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 WNT6Q9Y6F9 365 aa18.52■□□□□ 0.56
MSH6-203ENST00000420813 MYOFQ9NZM1 2061 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 EXOC3O60645 756 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 AFMP43652 599 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 AP3M2P53677 418 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 USP46P62068 366 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 NR1H3Q13133 447 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 CSRP2Q16527 193 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 FOXD4L6Q3SYB3 417 aaPredicted RBP18.51■□□□□ 0.55
MSH6-203ENST00000420813 FOXD4L3Q6VB84 417 aaPredicted RBP18.51■□□□□ 0.55
MSH6-203ENST00000420813 CEP57L1Q8IYX8 460 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 CAMKK1Q8N5S9 505 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 TMEM174Q8WUU8 243 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 GAB3Q8WWW8 586 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 ZNF516Q92618 1163 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 CD101Q93033 1021 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 ELOVL4Q9GZR5 314 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 XYLT2Q9H1B5 865 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 VRTNQ9H8Y1 702 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 FBRSL1Q9HCM7 1045 aaKnown RBP18.51■□□□□ 0.55
MSH6-203ENST00000420813 SEMA4GQ9NTN9 838 aa18.51■□□□□ 0.55
MSH6-203ENST00000420813 F8VP50 259 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 AKAP3O75969 853 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 NFATC1O95644 943 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 OLFM2O95897 454 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 SLFN14P0C7P3 912 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 PTPN1P18031 435 aaKnown RBP18.5■□□□□ 0.55
MSH6-203ENST00000420813 MYL6P60660 151 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 FAM160A2Q8N612 972 aaPredicted RBP18.5■□□□□ 0.55
MSH6-203ENST00000420813 NETO1Q8TDF5 533 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 LOXL4Q96JB6 756 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 RCOR1Q9UKL0 485 aa18.5■□□□□ 0.55
MSH6-203ENST00000420813 ZNF840PA6NDX5 716 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 A8MXQ7 604 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 KLRC4O43908 158 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 HOXC13P31276 330 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 CLDN10P78369 228 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 SLC7A9P82251 487 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 PRR23CQ6ZRP0 262 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 B3GALNT2Q8NCR0 500 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 TTC16Q8NEE8 873 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 CCDC26Q8TAB7 109 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 ACDQ96AP0 544 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 SLITRK1Q96PX8 696 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 DPEP3Q9H4B8 488 aa18.49■□□□□ 0.55
MSH6-203ENST00000420813 NXF1Q9UBU9 619 aaKnown RBP18.49■□□□□ 0.55
MSH6-203ENST00000420813 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.49■□□□□ 0.55
MSH6-203ENST00000420813 LEFTY2O00292 366 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 ACTN4O43707 911 aaKnown RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 PHACTR2O75167 634 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 RPP40O75818 363 aaKnown RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 ZXDBP98169 803 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 PSMD2Q13200 908 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 PKP1Q13835 747 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 TDRD10Q5VZ19 366 aaKnown RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 NAIF1Q69YI7 327 aaPredicted RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 SYT13Q7L8C5 426 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 CACNA2D4Q7Z3S7 1137 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 PLEKHO2Q8TD55 490 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 PARD3BQ8TEW8 1205 aa18.48■□□□□ 0.55
MSH6-203ENST00000420813 EZH1Q92800 747 aaPredicted RBP18.48■□□□□ 0.55
MSH6-203ENST00000420813 ZNF518BQ9C0D4 1074 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms