RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TADA3O75528 432 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 GPC5P78333 572 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 CYP4F8P98187 520 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 ACOT1Q86TX2 421 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 TRIM59Q8IWR1 403 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 DNASE1L2Q92874 299 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 NT5C1AQ9BXI3 368 aa22.71■■□□□ 1.23
CPNE1-211ENST00000420363 MAGED2Q9UNF1 606 aaPredicted RBP22.71■■□□□ 1.23
CPNE1-211ENST00000420363 ANAPC1Q9H1A4 1944 aa22.7■■□□□ 1.23
CPNE1-211ENST00000420363 LRRN2O75325 713 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 CCDC192P0DO97 292 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 PSMC3P17980 439 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 VITQ6UXI7 678 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 FUKQ8N0W3 1084 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 STKLD1Q8NE28 680 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 MRPS31Q92665 395 aaKnown RBP22.7■■□□□ 1.22
CPNE1-211ENST00000420363 SRRTQ9BXP5 876 aaKnown RBP22.7■■□□□ 1.22
CPNE1-211ENST00000420363 PLA2G2FQ9BZM2 168 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 SEMA4AQ9H3S1 761 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 DMAP1Q9NPF5 467 aaPredicted RBP22.7■■□□□ 1.22
CPNE1-211ENST00000420363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.7■■□□□ 1.221e-6■■■■■ 61.4
CPNE1-211ENST00000420363 DACH1Q9UI36 760 aa22.7■■□□□ 1.22
CPNE1-211ENST00000420363 STARD6P59095 220 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 CETN1Q12798 172 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 RBM43Q6ZSC3 357 aaKnown RBP22.69■■□□□ 1.22
CPNE1-211ENST00000420363 PAQR9Q6ZVX9 377 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 ARID3BQ8IVW6 561 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-211ENST00000420363 MFSD6LQ8IWD5 586 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 CMTM8Q8IZV2 173 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 GPT2Q8TD30 523 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 TWNKQ96RR1 684 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 TRPV5Q9NQA5 729 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 KRT82Q9NSB4 513 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 TMEM30AQ9NV96 361 aa22.69■■□□□ 1.22
CPNE1-211ENST00000420363 NCANO14594 1321 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 HEPACAM2A8MVW5 462 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 CLDN5O00501 218 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 PFKLP17858 780 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 CACNA2D1P54289 1103 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 FCHO2Q0JRZ9 810 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 CT47A1Q5JQC4 288 aaPredicted RBP22.68■■□□□ 1.22
CPNE1-211ENST00000420363 MON1AQ86VX9 555 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 WHAMMQ8TF30 809 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 MED10Q9BTT4 135 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 TRMT61BQ9BVS5 477 aaKnown RBP22.68■■□□□ 1.22
CPNE1-211ENST00000420363 FOXQ1Q9C009 403 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 KIF9Q9HAQ2 790 aa22.68■■□□□ 1.22
CPNE1-211ENST00000420363 MBD3O95983 291 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 LMNAP02545 664 aaKnown RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 CCDC130P13994 396 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 CD58P19256 250 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 TBXAS1P24557 533 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 ERCC5P28715 1186 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 VIPR2P41587 438 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 PPP3CCP48454 512 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 YWHAEP62258 255 aaKnown RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 FOXK2Q01167 660 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 PRKCQQ04759 706 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 ORC1Q13415 861 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 CUL2Q13617 745 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 ZNF268Q14587 947 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 DPCR1Q3MIW9 517 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 C1orf210Q8IVY1 113 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 PJA1Q8NG27 643 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 SLC2A14Q8TDB8 520 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 IRF7Q92985 503 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 MED15Q96RN5 788 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 HNRNPABQ99729 332 aaKnown RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 SLC46A2Q9BY10 475 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 CSNK1G1Q9HCP0 422 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 CISHQ9NSE2 258 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 R4GN57 208 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 SPTBN4Q9H254 2564 aa22.67■■□□□ 1.22
CPNE1-211ENST00000420363 HELZP42694 1942 aaKnown RBP22.67■■□□□ 1.22
CPNE1-211ENST00000420363 AP1G2O75843 785 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 RTN3O95197 1032 aaPredicted RBP22.66■■□□□ 1.22
CPNE1-211ENST00000420363 PRAMEF12O95522 483 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 AFPP02771 609 aaKnown RBP22.66■■□□□ 1.22
CPNE1-211ENST00000420363 AVPR1AP37288 418 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 PDE6CP51160 858 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 USP46P62068 366 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 SLC44A4Q53GD3 710 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 NUP93Q8N1F7 819 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 C12orf29Q8N999 325 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 OVCA2Q8WZ82 227 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 TATDN2Q93075 761 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 RSPRY1Q96DX4 576 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 CNOT6LQ96LI5 555 aaKnown RBP22.66■■□□□ 1.22
CPNE1-211ENST00000420363 ARID3AQ99856 593 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 BRD9Q9H8M2 597 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 PNPLA8Q9NP80 782 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 FAM49BQ9NUQ9 324 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 COMMD8Q9NX08 183 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 DLGAP2Q9P1A6 1054 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 MYH10P35580 1976 aa22.66■■□□□ 1.22
CPNE1-211ENST00000420363 TICRRQ7Z2Z1 1910 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 GVINP1Q7Z2Y8 2422 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 DPYSL4O14531 572 aa22.65■■□□□ 1.22
CPNE1-211ENST00000420363 FAM200BP0CF97 657 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms