RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 BTG3Q14201 252 aaPredicted RBP8.79□□□□□ -1
UBR4-206ENST00000419533 SNX31Q8N9S9 440 aa8.79□□□□□ -1
UBR4-206ENST00000419533 DNAJB3Q8WWF6 145 aa8.79□□□□□ -1
UBR4-206ENST00000419533 CHP1Q99653 195 aa8.79□□□□□ -1
UBR4-206ENST00000419533 MAF1Q9H063 256 aa8.79□□□□□ -1
UBR4-206ENST00000419533 GOLPH3Q9H4A6 298 aa8.79□□□□□ -1
UBR4-206ENST00000419533 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.79□□□□□ -1
UBR4-206ENST00000419533 THG1LQ9NWX6 298 aaKnown RBP8.79□□□□□ -1
UBR4-206ENST00000419533 TRPV2Q9Y5S1 764 aa8.79□□□□□ -1
UBR4-206ENST00000419533 ZMYM2Q9UBW7 1377 aa8.79□□□□□ -1
UBR4-206ENST00000419533 C2orf81A6NN90 581 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PPP1R3GB7ZBB8 358 aa8.78□□□□□ -1
UBR4-206ENST00000419533 ZNF200P98182 395 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 PDK2Q15119 407 aa8.78□□□□□ -1
UBR4-206ENST00000419533 FBXO47Q5MNV8 452 aa8.78□□□□□ -1
UBR4-206ENST00000419533 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
UBR4-206ENST00000419533 MKL1Q969V6 931 aa8.78□□□□□ -1
UBR4-206ENST00000419533 CYFIP2Q96F07 1278 aa8.78□□□□□ -1
UBR4-206ENST00000419533 THOC1Q96FV9 657 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 TRIM4Q9C037 500 aa8.78□□□□□ -1
UBR4-206ENST00000419533 NEUROG2Q9H2A3 272 aa8.78□□□□□ -1
UBR4-206ENST00000419533 KIF17Q9P2E2 1029 aa8.78□□□□□ -1
UBR4-206ENST00000419533 A0A0G2JLL6 359 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 HEATR9A2RTY3 570 aa8.78□□□□□ -1
UBR4-206ENST00000419533 RSPH10B2B2RC85 870 aa8.78□□□□□ -1
UBR4-206ENST00000419533 RSPH10BP0C881 870 aa8.78□□□□□ -1
UBR4-206ENST00000419533 FGFR4P22455 802 aa8.78□□□□□ -1
UBR4-206ENST00000419533 CYP24A1Q07973 514 aa8.78□□□□□ -1
UBR4-206ENST00000419533 TTLL9Q3SXZ7 439 aa8.78□□□□□ -1
UBR4-206ENST00000419533 AARS2Q5JTZ9 985 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 SLC27A1Q6PCB7 646 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PRRT2Q7Z6L0 340 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 MIB1Q86YT6 1006 aa8.78□□□□□ -1
UBR4-206ENST00000419533 RNF168Q8IYW5 571 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 CARNMT1Q8N4J0 409 aa8.78□□□□□ -1
UBR4-206ENST00000419533 RIN2Q8WYP3 895 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 WWP1Q9H0M0 922 aa8.78□□□□□ -1
UBR4-206ENST00000419533 TLR8Q9NR97 1041 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
UBR4-206ENST00000419533 TAF6LQ9Y6J9 622 aa8.78□□□□□ -1
UBR4-206ENST00000419533 USP27XA6NNY8 438 aa8.78□□□□□ -1
UBR4-206ENST00000419533 RBP3P10745 1247 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PREPLQ4J6C6 727 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 RASIP1Q5U651 963 aa8.78□□□□□ -1
UBR4-206ENST00000419533 SLC30A10Q6XR72 485 aa8.78□□□□□ -1
UBR4-206ENST00000419533 KCNB2Q92953 911 aa8.78□□□□□ -1
UBR4-206ENST00000419533 ATP6V1G3Q96LB4 118 aa8.78□□□□□ -1
UBR4-206ENST00000419533 TRABDQ9H4I3 376 aa8.78□□□□□ -1
UBR4-206ENST00000419533 CHCHD3Q9NX63 227 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 ADA2Q9NZK5 511 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PSMC3IPQ9P2W1 217 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 SYNCRIPO60506 623 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 CKBP12277 381 aa8.78□□□□□ -1
UBR4-206ENST00000419533 VCLP18206 1134 aa8.78□□□□□ -1
UBR4-206ENST00000419533 HSPA9P38646 679 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 FLT3LGP49771 235 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PRKCQQ04759 706 aa8.78□□□□□ -1
UBR4-206ENST00000419533 SMTNL2Q2TAL5 461 aa8.78□□□□□ -1
UBR4-206ENST00000419533 GRAMD1BQ3KR37 738 aa8.78□□□□□ -1
UBR4-206ENST00000419533 SPDYAQ5MJ70 313 aa8.78□□□□□ -1
UBR4-206ENST00000419533 ACBD5Q5T8D3 534 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 TATDN1Q6P1N9 297 aa8.78□□□□□ -1
UBR4-206ENST00000419533 ZNF720Q7Z2F6 126 aa8.78□□□□□ -1
UBR4-206ENST00000419533 GSPT2Q8IYD1 628 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 UBXN6Q9BZV1 441 aa8.78□□□□□ -1
UBR4-206ENST00000419533 YY1AP1Q9H869 796 aa8.78□□□□□ -1
UBR4-206ENST00000419533 GIMAP4Q9NUV9 329 aa8.78□□□□□ -1
UBR4-206ENST00000419533 AAR2Q9Y312 384 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 ALG6Q9Y672 507 aa8.78□□□□□ -1
UBR4-206ENST00000419533 SUPT3HB4E1H0 165 aa8.78□□□□□ -1
UBR4-206ENST00000419533 C5orf58C9J3I9 102 aa8.78□□□□□ -1
UBR4-206ENST00000419533 STIP1P31948 543 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 BST2Q10589 180 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 MTF1Q14872 753 aa8.78□□□□□ -1
UBR4-206ENST00000419533 KRT72Q14CN4 511 aa8.78□□□□□ -1
UBR4-206ENST00000419533 HIST2H2ACQ16777 129 aaPredicted RBP8.78□□□□□ -1
UBR4-206ENST00000419533 EPC2Q52LR7 807 aa8.78□□□□□ -1
UBR4-206ENST00000419533 HIST2H2AA3Q6FI13 130 aa8.78□□□□□ -1
UBR4-206ENST00000419533 EFL1Q7Z2Z2 1120 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 UNC45BQ8IWX7 931 aa8.78□□□□□ -1
UBR4-206ENST00000419533 MSL3Q8N5Y2 521 aaKnown RBP8.78□□□□□ -1
UBR4-206ENST00000419533 DDI1Q8WTU0 396 aa8.78□□□□□ -1
UBR4-206ENST00000419533 COG1Q8WTW3 980 aa8.78□□□□□ -1
UBR4-206ENST00000419533 MRGBPQ9NV56 204 aa8.78□□□□□ -1
UBR4-206ENST00000419533 PSD3Q9NYI0 1048 aa8.78□□□□□ -1
UBR4-206ENST00000419533 DCTN4Q9UJW0 460 aa8.78□□□□□ -1
UBR4-206ENST00000419533 SLC12A8A0AV02 714 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 CASTOR2A6NHX0 329 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 ATMINO43313 823 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 XYLBO75191 536 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TADA3O75528 432 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 LSM8O95777 96 aaKnown RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 PPP3CCP48454 512 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PTPAQ15257 358 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 MDH1BQ5I0G3 518 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SYCP2LQ5T4T6 812 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TRIM65Q6PJ69 517 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SLFN11Q7Z7L1 901 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TMEM176AQ96HP8 235 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms