RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PRKAR2AP13861 404 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 KDELR1P24390 212 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 CCND3P30281 292 aaPredicted RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 MIPP30301 263 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 GJC1P36383 396 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PTPN9P43378 593 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ACADSBP45954 432 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PLTPP55058 493 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 VCPP55072 806 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 LILRA4P59901 499 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 SLC6A3Q01959 620 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ADCY2Q08462 1091 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PDE4CQ08493 712 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ZNF844Q08AG5 666 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PTK7Q13308 1070 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PPP1R7Q15435 360 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PMF1Q6P1K2 205 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 OSTM1Q86WC4 334 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 RELL1Q8IUW5 271 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ADGRF2Q8IZF7 708 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TMEM86AQ8N2M4 240 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ALLCQ8N6M5 410 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 EMC1Q8N766 993 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 CCDC89Q8N998 374 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PCSK9Q8NBP7 692 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 BBOF1Q8ND07 529 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 APPL2Q8NEU8 664 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 UBA3Q8TBC4 463 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 RNF25Q96BH1 459 aaPredicted RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PIWIL1Q96J94 861 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TNIP3Q96KP6 325 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 ATP6V1G3Q96LB4 118 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 HSFY1Q96LI6 401 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TBCBQ99426 244 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 HNRNPABQ99729 332 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 C11orf84Q9BUA3 381 aaPredicted RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 HEMGNQ9BXL5 484 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 PABPC3Q9H361 631 aaKnown RBP9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 AAASQ9NRG9 546 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 KLK14Q9P0G3 267 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 SRRDQ9UH36 339 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TANC1Q9C0D5 1861 aa9.51□□□□□ -0.89
LINCMD1-201ENST00000418518 TULP2O00295 520 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 NDC80O14777 642 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 XPO1O14980 1071 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 HUS1O60921 280 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 RNF8O76064 485 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 GNRH1P01148 92 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 KRT14P02533 472 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 ATF2P15336 505 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PAX3P23760 479 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 RPL9P32969 192 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 GNL1P36915 607 aaPredicted RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 SSR1P43307 286 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PMS2P54278 862 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 GYS2P54840 703 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 CALCOCO2Q13137 446 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 SNX1Q13596 522 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 BYSLQ13895 437 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 KCNA10Q16322 511 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 OR6B2Q6IFH4 312 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 KDM7AQ6ZMT4 941 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 AGMOQ6ZNB7 445 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 TRMT10CQ7L0Y3 403 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 CROCCP2Q86T23 111 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 B3GALNT2Q8NCR0 500 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 OR6B3Q8NGW1 331 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 RXFP2Q8WXD0 754 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 CENPIQ92674 756 aaPredicted RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 CAPNS2Q96L46 248 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PEBP4Q96S96 227 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 SNX25Q9H3E2 840 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 DPEP3Q9H4B8 488 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 AGO3Q9H9G7 860 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 RSAD1Q9HA92 442 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 GOLGA2P5Q9HBQ8 144 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PCDH9Q9HC56 1237 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PRDM10Q9NQV6 1147 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 FAM49BQ9NUQ9 324 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 KLHL11Q9NVR0 708 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 RNF186Q9NXI6 227 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 ASIC3Q9UHC3 531 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 DDX20Q9UHI6 824 aaKnown RBP9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 DNPEPQ9ULA0 475 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 USP18Q9UMW8 372 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 PTPN22Q9Y2R2 807 aa9.5□□□□□ -0.89
LINCMD1-201ENST00000418518 A6NNZ2 444 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 APOC4-APOC2K7ER74 178 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 MDM4O15151 490 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 APOC2P02655 101 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 THP07101 528 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CTSHP09668 335 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 MYZAPP0CAP1 466 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 KRT10P13645 584 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 CCDC130P13994 396 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 PDGFRAP16234 1089 aa9.49□□□□□ -0.89
LINCMD1-201ENST00000418518 LMO2P25791 158 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms