RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 FTCDO95954 541 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 PTPN7P35236 360 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 BRCC3P46736 316 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 SLC11A1P49279 550 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 GPR17Q13304 367 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 MTA1Q13330 715 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 TCTN1Q2MV58 587 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 BOLA3Q53S33 107 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 CCDC70Q6NSX1 233 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 FUT10Q6P4F1 479 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 OLFML1Q6UWY5 402 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 CLEC20AQ6ZU45 233 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 RTL10Q7L3V2 364 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 RSRC2Q7L4I2 434 aaKnown RBP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 KATNAL2Q8IYT4 538 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 MMGT1Q8N4V1 131 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 GPR161Q8N6U8 529 aaKnown RBP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 EXD1Q8NHP7 514 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 SPPL2BQ8TCT7 592 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 HERVK_113Q902F9 699 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 UBXN4Q92575 508 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 CENPIQ92674 756 aaPredicted RBP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 GOLGA1Q92805 767 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 IGSF21Q96ID5 467 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZNF558Q96NG5 402 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 TBCBQ99426 244 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 TTPALQ9BTX7 342 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 MARCH5Q9NX47 278 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 DNAJB4Q9UDY4 337 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 RWDD3Q9Y3V2 267 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 SCN1AP35498 2009 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 COL4A6Q14031 1691 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 TRIP11Q15643 1979 aa10.63□□□□□ -0.71
HMGA1P6-201ENST00000418454 HTTP42858 3142 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 TARSL2A2RTX5 802 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 E5RJQ4 531 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PGRMC1O00264 195 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZRANB2O95218 330 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 F9P00740 461 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 CALCAP01258 141 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 EN2P19622 333 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 GPD1P21695 349 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 NOS2P35228 1153 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 RFC1P35251 1148 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZNF135P52742 658 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 YWHAZP63104 245 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 MRPS5P82675 430 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 MDH1BQ5I0G3 518 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 VARS2Q5ST30 1063 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 ACBD5Q5T8D3 534 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FAM171A1Q5VUB5 890 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 TPGS2Q68CL5 300 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 OR6B2Q6IFH4 312 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 SLC8B1Q6J4K2 584 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 STRADAQ7RTN6 431 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 DDX53Q86TM3 631 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FAM35AQ86V20 835 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PIGZQ86VD9 579 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 SPATA2LQ8IUW3 424 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 ARHGAP18Q8N392 663 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 ZNF276Q8N554 614 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 EIF1ADQ8N9N8 165 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 TEKT4Q8WW24 435 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PIK3R5Q8WYR1 880 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 KHSRPQ92945 711 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 CLP1Q92989 425 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 NT5C3BQ969T7 300 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PGAP3Q96FM1 320 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 SPATA17Q96L03 361 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 MED10Q9BTT4 135 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 DDX23Q9BUQ8 820 aaKnown RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FRMD8P1Q9BZ68 369 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FBXO44Q9H4M3 255 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PRDM5Q9NQX1 630 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FAM49BQ9NUQ9 324 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 SPG21Q9NZD8 308 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 IL37Q9NZH6 218 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 FEZ2Q9UHY8 353 aaPredicted RBP10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 MTUS1Q9ULD2 1270 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 PCDHB5Q9Y5E4 795 aa10.62□□□□□ -0.71
HMGA1P6-201ENST00000418454 LTBP2Q14767 1821 aa10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 TDRD15B5MCY1 1934 aaKnown RBP10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 GOLGA6L10A0A0M3HER8 536 aa10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 FSCN2O14926 492 aa10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 PAPSS1O43252 624 aaPredicted RBP10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 ATP2C2O75185 946 aa10.61□□□□□ -0.71
HMGA1P6-201ENST00000418454 TADA3O75528 432 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms