RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CSNK1G1Q9HCP0 422 aa21.93■■□□□ 1.1
PKNOX1-202ENST00000418336 UXTQ9UBK9 157 aaPredicted RBP21.93■■□□□ 1.1
PKNOX1-202ENST00000418336 CTNND2Q9UQB3 1225 aa21.93■■□□□ 1.1
PKNOX1-202ENST00000418336 CCDC130P13994 396 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 GDI1P31150 447 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 MARSP56192 900 aaKnown RBP21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 ZXDBP98169 803 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 NHLH1Q02575 133 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 DENND5BQ6ZUT9 1274 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 UBR7Q8N806 425 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 MAB21L3Q8N8X9 362 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 TNIP3Q96KP6 325 aa21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 ARMCX3Q9UH62 379 aaPredicted RBP21.92■■□□□ 1.1
PKNOX1-202ENST00000418336 KANSL1LA0AUZ9 987 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 FAM92AA1XBS5 289 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 C2orf78A6NCI8 922 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 CHADO15335 359 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 CD72P21854 359 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 STIM1Q13586 685 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 ZNF268Q14587 947 aaPredicted RBP21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 TAF12Q16514 161 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 DCAF17Q5H9S7 520 aaPredicted RBP21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 LMO3Q8TAP4 145 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 CYP2S1Q96SQ9 504 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 ZMYM5Q9UJ78 669 aa21.91■■□□□ 1.1
PKNOX1-202ENST00000418336 HELZP42694 1942 aaKnown RBP21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 USP34Q70CQ2 3546 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 HHLA1C9JL84 531 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 STX10O60499 249 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 OLFM2O95897 454 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 STX17P56962 302 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 PAK1Q13153 545 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 TPRG1Q6ZUI0 275 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 TRIM59Q8IWR1 403 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 CELF5Q8N6W0 485 aaKnown RBP21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 SLC2A14Q8TDB8 520 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 IRF7Q92985 503 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 CHFRQ96EP1 664 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 ZFYVE19Q96K21 471 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 GCNAQ96QF7 691 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 BRD9Q9H8M2 597 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 LTB4R2Q9NPC1 389 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 FAM49BQ9NUQ9 324 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 MIA3Q5JRA6 1907 aa21.9■■□□□ 1.1
PKNOX1-202ENST00000418336 ZNF840PA6NDX5 716 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 ZNF263O14978 683 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 DCNP07585 359 aaKnown RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 TARSP26639 723 aaKnown RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 FMO5P49326 533 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 MLLT6P55198 1093 aaPredicted RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 TCERG1LQ5VWI1 586 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 SCAMP5Q8TAC9 235 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 BPIFB1Q8TDL5 484 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 MRPS31Q92665 395 aaKnown RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 FAM122AQ96E09 287 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 HNRNPABQ99729 332 aaKnown RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 PRRX2Q99811 253 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 FAM83CQ9BQN1 747 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 OSBPL6Q9BZF3 934 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 IMPG2Q9BZV3 1241 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 METTL14Q9HCE5 456 aaKnown RBP21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 SIT1Q9Y3P8 196 aa21.89■■□□□ 1.09
PKNOX1-202ENST00000418336 VPS13AQ96RL7 3174 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 BICDL2A1A5D9 508 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 OAS1P00973 400 aaKnown RBP21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 TCF3P15923 654 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 CD58P19256 250 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 ANXA13P27216 316 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 PGFP49763 221 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 USP4Q13107 963 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 ZNF77Q15935 545 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 IRF2BP1Q8IU81 584 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 ARL14EPQ8N8R7 260 aaPredicted RBP21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 DTWD2Q8NBA8 298 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 SLC4A11Q8NBS3 891 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 CLDN23Q96B33 292 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 SMARCD1Q96GM5 515 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 SHDQ96IW2 340 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 PHOX2BQ99453 314 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 NT5C1AQ9BXI3 368 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 HPS4Q9NQG7 708 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 KRT82Q9NSB4 513 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 CISHQ9NSE2 258 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 RWDD2AQ9UIY3 292 aa21.88■■□□□ 1.09
PKNOX1-202ENST00000418336 OTOL1A6NHN0 477 aaPredicted RBP21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 AP1G2O75843 785 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 ZDHHC11BP0C7U3 371 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 SLC5A3P53794 718 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 RAD23BP54727 409 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 PTPN5P54829 565 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 TNK2Q07912 1038 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 TAF10Q12962 218 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 ARHGAP29Q52LW3 1261 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 SNX30Q5VWJ9 437 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 CLEC20AQ6ZU45 233 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 GPRIN1Q7Z2K8 1008 aa21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 MAML2Q8IZL2 1156 aaPredicted RBP21.87■■□□□ 1.09
PKNOX1-202ENST00000418336 NUP93Q8N1F7 819 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms