RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 DTX3LQ8TDB6 740 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 FAF2Q96CS3 445 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 PLCD4Q9BRC7 762 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 HEY2Q9UBP5 337 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 TYROBPO43914 113 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 RNF8O76064 485 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 TOP3BO95985 862 aaKnown RBP12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ABHD2P08910 425 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 PHBP35232 272 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 SLC25A11Q02978 314 aaKnown RBP12.45□□□□□ -0.42
LIMK1-202ENST00000418310 MOGSQ13724 837 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 XRRA1Q6P2D8 792 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 TLDC1Q6P9B6 456 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 PRPF39Q86UA1 669 aaKnown RBP12.45□□□□□ -0.42
LIMK1-202ENST00000418310 SLC35B2Q8TB61 432 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 CCHCR1Q8TD31 782 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 C10orf82Q8WW14 230 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 SERAC1Q96JX3 654 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
LIMK1-202ENST00000418310 ADPGKQ9BRR6 497 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 MAGEB5Q9BZ81 275 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 SMG5Q9UPR3 1016 aaKnown RBP12.45□□□□□ -0.42
LIMK1-202ENST00000418310 SHOC2Q9UQ13 582 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 STARD13Q9Y3M8 1113 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 NFASCO94856 1347 aa12.45□□□□□ -0.42
LIMK1-202ENST00000418310 NFKBIEO00221 500 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 INHBAP08476 426 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 HOXC6P09630 235 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 T-ENOLP0DO92 83 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 CCND1P24385 295 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 MCL1Q07820 350 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 BSPRYQ5W0U4 402 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 RIBC1Q8N443 379 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 EBF2Q9HAK2 575 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 MAD1L1Q9Y6D9 718 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 UGT1A9O60656 530 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 ITGAVP06756 1048 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 SERPINB3P29508 390 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 ATF7IP2Q5U623 682 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 APBB1IPQ7Z5R6 666 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 MIEF2Q96C03 454 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 GRAMD1AQ96CP6 724 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 PEBP4Q96S96 227 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 UGT1A7Q9HAW7 530 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 UGT1A10Q9HAW8 530 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 UGT1A8Q9HAW9 530 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 FAM49BQ9NUQ9 324 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 DDX56Q9NY93 547 aaKnown RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 USP18Q9UMW8 372 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 ACTL7BQ9Y614 415 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 TCRBV5S1A1TA0A578 114 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 C3orf70A6NLC5 250 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 KCNN4O15554 427 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 APRTP07741 180 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 TROVE2P10155 538 aaKnown RBP eCLIP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 RXRBP28702 533 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 RIPK1Q13546 671 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 RCN2Q14257 317 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 NKD2Q969F2 451 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 LPIN3Q9BQK8 851 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 MIS12Q9H081 205 aa12.44□□□□□ -0.42
LIMK1-202ENST00000418310 IQCGQ9H095 443 aaKnown RBP12.44□□□□□ -0.42
LIMK1-202ENST00000418310 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 PRPF4O43172 522 aaKnown RBP eCLIP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 DCTN3O75935 186 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 MICAL2O94851 1124 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 KRT81Q14533 505 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 AMHR2Q16671 573 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 NAT8LQ8N9F0 302 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 MAGEC3Q8TD91 643 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 SEPT1Q8WYJ6 367 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 SLC7A6OSQ96CW6 309 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 MANSC1Q9H8J5 431 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 ARL8BQ9NVJ2 186 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 TCRBV9S1A1TA0A576 114 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CCNB1P14635 433 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 PDGFRAP16234 1089 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 HMGB2P26583 209 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 PCK1P35558 622 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 YARSP54577 528 aaKnown RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 EFHC2Q5JST6 749 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 PPP1R15BQ5SWA1 713 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 FAM160B1Q5W0V3 765 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 C1orf127Q8N9H9 656 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 CCDC110Q8TBZ0 833 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 TSSK1BQ9BXA7 367 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 ELOVL4Q9GZR5 314 aa12.43□□□□□ -0.42
LIMK1-202ENST00000418310 DENND2DQ9H6A0 471 aaPredicted RBP12.43□□□□□ -0.42
LIMK1-202ENST00000418310 RPF1Q9H9Y2 349 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms