RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KXD1Q9BQD3 176 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 MRPL4Q9BYD3 311 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 SEMA4CQ9C0C4 833 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 TMEM117Q9H0C3 514 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 USP44Q9H0E7 712 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 ATP6V0A4Q9HBG4 840 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 HSPBP1Q9NZL4 362 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CDH7Q9ULB5 785 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 PADI3Q9ULW8 664 aa6.05□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC194A0A1B0GVG4 234 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 DENND3A2RUS2 1198 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 M0QZ92 97 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 PES1O00541 588 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 SIGLEC6O43699 453 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 VAMP4O75379 141 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 SMC2O95347 1197 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 PRAMEF1O95521 474 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 CBX7O95931 251 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 CHRNB1P11230 501 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 VDRP11473 427 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 MYCLP1P12525 358 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 SDSP20132 328 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 METAP2P50579 478 aaKnown RBP eCLIP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 GFRA1P56159 465 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 RPS6P62753 249 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 MRPS6P82932 125 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 RHDQ02161 417 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 NCBP1Q09161 790 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 SEMA3BQ13214 749 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 LRRC32Q14392 662 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 RBBP5Q15291 538 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 STXBP2Q15833 593 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 NTRK3Q16288 839 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 SFRP5Q5T4F7 317 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 OGFOD3Q6PK18 319 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC186Q7Z3E2 898 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 CD163Q86VB7 1156 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 ABI1Q8IZP0 508 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 ZNF707Q96C28 371 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 FAXDC2Q96IV6 333 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 COX4I2Q96KJ9 171 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 POLR3CQ9BUI4 534 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 DUSP15Q9H1R2 295 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 ZNF446Q9NWS9 450 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 TMEM161AQ9NX61 479 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 UTP6Q9NYH9 597 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 FRMD4BQ9Y2L6 1034 aa6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 HEMK1Q9Y5R4 338 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-206ENST00000417628 ASXL3Q9C0F0 2248 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 FRMPD4Q14CM0 1322 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 IGSF9BQ9UPX0 1349 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 APC2O95996 2303 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SHISA3A0PJX4 238 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 HMX2A2RU54 273 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 BLACEA4D250 179 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SMTNL1A8MU46 457 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 APAF1O14727 1248 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 RRP8O43159 456 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 MGEA5O60502 916 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 PLA2G6O60733 806 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 RFPL2O75678 378 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 PAPLNO95428 1278 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 RPLP2P05387 115 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 FTH1P19P0C7X4 201 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SLC1A4P43007 532 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CTSKP43235 329 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 GRIK3Q13003 919 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 NMIQ13287 307 aaPredicted RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CRYMQ14894 314 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 TRIM61Q5EBN2 209 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 DNAJC21Q5F1R6 531 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CCDC158Q5M9N0 1113 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CELF3Q5SZQ8 465 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 C12orf60Q5U649 245 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 ZNF280DQ6N043 979 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 PDXDC1Q6P996 788 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 C22orf34Q6ZV56 151 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SLC24A5Q71RS6 500 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 ZAR1Q86SH2 424 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 DDX53Q86TM3 631 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SMC5Q8IY18 1101 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SAMD3Q8N6K7 520 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 FBXO18Q8NFZ0 1043 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 GIMAP7Q8NHV1 300 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 SLC7A14Q8TBB6 771 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 HDAC7Q8WUI4 952 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 DNAJB3Q8WWF6 145 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 ZBTB9Q96C00 473 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 C1orf159Q96HA4 380 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CASD1Q96PB1 797 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 MCMBPQ9BTE3 642 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 MAF1Q9H063 256 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 IQCGQ9H095 443 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 C7orf69Q9H7B7 122 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 TRPV5Q9NQA5 729 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 RGS18Q9NS28 235 aa6.03□□□□□ -1.44
ECHDC1-206ENST00000417628 CHST7Q9NS84 486 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms