RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 OSCP1Q8WVF1 389 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 ELOVL4Q9GZR5 314 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 TRPC7Q9HCX4 862 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 NXF1Q9UBU9 619 aaKnown RBP19.64■□□□□ 0.73
VPS16-204ENST00000417508 ZDHHC9Q9Y397 364 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 CEP250Q9BV73 2442 aa19.64■□□□□ 0.73
VPS16-204ENST00000417508 CALUO43852 315 aaPredicted RBP19.63■□□□□ 0.73
VPS16-204ENST00000417508 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
VPS16-204ENST00000417508 P4HA1P13674 534 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 NR1H3Q13133 447 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 ZNF77Q15935 545 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 SGSM1Q2NKQ1 1148 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 ZNF667Q5HYK9 610 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 WDR44Q5JSH3 913 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 CPA6Q8N4T0 437 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 DCLK2Q8N568 766 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 ARL14EPQ8N8R7 260 aaPredicted RBP19.63■□□□□ 0.73
VPS16-204ENST00000417508 B3GALNT2Q8NCR0 500 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 PLEKHO2Q8TD55 490 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 TAF4BQ92750 862 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 ATP2A3Q93084 1043 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 TNIP3Q96KP6 325 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 DUS2Q9NX74 493 aaKnown RBP19.63■□□□□ 0.73
VPS16-204ENST00000417508 ARHGAP26Q9UNA1 814 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 TRAF3IP3Q9Y228 551 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 FRMD4BQ9Y2L6 1034 aa19.63■□□□□ 0.73
VPS16-204ENST00000417508 ATP8B3O60423 1300 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 A0A1W2PQ27 194 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 A0A1W2PQ64 194 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 A0A1W2PQD8 194 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 LRRIQ3A6PVS8 624 aaPredicted RBP19.62■□□□□ 0.73
VPS16-204ENST00000417508 F8VP50 259 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 MAPK13O15264 365 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 NR3C1P04150 777 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 DRD1P21728 446 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 CASP4P49662 377 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 USP4Q13107 963 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 NCOA4Q13772 614 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 ZNF699Q32M78 642 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 FBXO43Q4G163 708 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 TDRD10Q5VZ19 366 aaKnown RBP19.62■□□□□ 0.73
VPS16-204ENST00000417508 TRIM68Q6AZZ1 485 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 Q6ZS52 159 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 LONP2Q86WA8 852 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 SLC22A12Q96S37 553 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 ECT2Q9H8V3 914 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 GMEB2Q9UKD1 530 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 NME7Q9Y5B8 376 aa19.62■□□□□ 0.73
VPS16-204ENST00000417508 ATG2BQ96BY7 2078 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 C2orf78A6NCI8 922 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 ZNF840PA6NDX5 716 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 OTOL1A6NHN0 477 aaPredicted RBP19.61■□□□□ 0.73
VPS16-204ENST00000417508 K7ESF4 209 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 RHOBTB3O94955 611 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 ARSAP15289 507 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 SDHBP21912 280 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 IFNAR2P48551 515 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 NFIL3Q16649 462 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 LAIR1Q6GTX8 287 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 FSTL4Q6MZW2 842 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 CCDC26Q8TAB7 109 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 RIN3Q8TB24 985 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 SH3RF2Q8TEC5 729 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 CCDC34Q96HJ3 373 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 SLITRK1Q96PX8 696 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 B3GNT5Q9BYG0 378 aa19.61■□□□□ 0.73
VPS16-204ENST00000417508 CCDC163A0A0D9SF12 145 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 RTN3O95197 1032 aaPredicted RBP19.6■□□□□ 0.73
VPS16-204ENST00000417508 GJA4P35212 333 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 GALK1P51570 392 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 NDUFA8P51970 172 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 USP46P62068 366 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 SLC7A9P82251 487 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 ENPEPQ07075 957 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 ZACNQ401N2 412 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 NUP93Q8N1F7 819 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 OVCA2Q8WZ82 227 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 P2RY13Q9BPV8 354 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 DPEP3Q9H4B8 488 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 COMMD8Q9NX08 183 aa19.6■□□□□ 0.73
VPS16-204ENST00000417508 CHURC1-FNTBB4DL54 471 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 LRP3O75074 770 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 VNN1O95497 513 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 RPL13P26373 211 aaKnown RBP19.59■□□□□ 0.73
VPS16-204ENST00000417508 YWHAQP27348 245 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 FNTBP49356 437 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 SIM2Q14190 667 aaPredicted RBP19.59■□□□□ 0.73
VPS16-204ENST00000417508 PUM1Q14671 1186 aaKnown RBP eCLIP19.59■□□□□ 0.73
VPS16-204ENST00000417508 EML3Q32P44 896 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 SV2AQ7L0J3 742 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 WDR5BQ86VZ2 330 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 PDZD8Q8NEN9 1154 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 CHFRQ96EP1 664 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 ZNF518BQ9C0D4 1074 aa19.59■□□□□ 0.73
VPS16-204ENST00000417508 PRR5-ARHGAP8B1AHC4 643 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 SLC9A3R1O14745 358 aaPredicted RBP19.58■□□□□ 0.72
VPS16-204ENST00000417508 HRO43593 1189 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 NFATC1O95644 943 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 RETP07949 1114 aa19.58■□□□□ 0.72
VPS16-204ENST00000417508 TRIM21P19474 475 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms