RNA–Protein interactions for RNA: ENST00000415495.5

CEACAM3-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 1 (best)

Gene CEACAM3, Length 1,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-203ENST00000415495 MIF4GDA9UHW6 222 aaKnown RBP22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 PDE2AO00408 941 aaPredicted RBP22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 TBC1D4O60343 1298 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 AP1G2O75843 785 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 CTNNA2P26232 953 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 MAN1A1P33908 653 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 TSPY1Q01534 308 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 MAPRE1Q15691 268 aaKnown RBP22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 TMEM240Q5SV17 173 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 ZDHHC17Q8IUH5 632 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 RNF168Q8IYW5 571 aaPredicted RBP22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 FNIP1Q8TF40 1166 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 ALG3Q92685 438 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 PBKQ96KB5 322 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 METTL5Q9NRN9 209 aaKnown RBP22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 LCMT1Q9UIC8 334 aa22.56■■□□□ 1.2
CEACAM3-203ENST00000415495 KCNK3O14649 394 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 MAP3K7CLP57077 242 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 SLC8A3P57103 927 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 SLC6A3Q01959 620 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 FAM102AQ5T9C2 384 aaPredicted RBP22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 CEP57Q86XR8 500 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 NIPA2Q8N8Q9 360 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 IGSF21Q96ID5 467 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 CAPZA3Q96KX2 299 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 B3GALT6Q96L58 329 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 KCNK16Q96T55 309 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 RHOBTB2Q9BYZ6 727 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 PCDHA3Q9Y5H8 950 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 PTPRSQ13332 1948 aa22.55■■□□□ 1.2
CEACAM3-203ENST00000415495 HHLA1C9JL84 531 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 SPOPO43791 374 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 OR4Q2P0C623 313 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 CTNNA1P35221 906 aaKnown RBP22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 MARCKSL1P49006 195 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 DCAF12L1Q5VU92 463 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 TRNP1Q6NT89 227 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 KCNT2Q6UVM3 1135 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 EMC1Q8N766 993 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 CEP112Q8N8E3 955 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 SMARCD1Q96GM5 515 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 VN1R3Q9BXE9 311 aa22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 MRPL42Q9Y6G3 142 aaKnown RBP22.54■■□□□ 1.2
CEACAM3-203ENST00000415495 OR6C75A6NL08 312 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 BDNFP23560 247 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 GTF2F1P35269 517 aaKnown RBP eCLIP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 SCNN1AP37088 669 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 BTG3Q14201 252 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 PIGHQ14442 188 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 TAF5Q15542 800 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 RTP2Q5QGT7 225 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 MS4A14Q96JA4 679 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 CXXC1Q9P0U4 656 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 RNF14Q9UBS8 474 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 CCDC66A2RUB6 948 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 C2CD4BA6NLJ0 364 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 F8VP50 259 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 LCP1P13796 627 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 RABGGTBP53611 331 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 HTRA4P83105 476 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 ADCY1Q08828 1119 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 CTXN3Q4LDR2 81 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 RAB41Q5JT25 222 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 DAB2IPQ5VWQ8 1189 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 ZNF572Q7Z3I7 529 aaPredicted RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 DCP1BQ8IZD4 617 aaKnown RBP22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 SLC39A11Q8N1S5 342 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 CLEC4CQ8WTT0 213 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 TTPALQ9BTX7 342 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 NLRC5Q86WI3 1866 aa22.53■■□□□ 1.2
CEACAM3-203ENST00000415495 ZBBXA8MT70 800 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 CTIFO43310 598 aaKnown RBP22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 GJB5O95377 273 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 SYN1P17600 705 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 TAS2R40P59535 323 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 SLC39A12Q504Y0 691 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 RSPO2Q6UXX9 243 aaPredicted RBP22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 SLC26A9Q7LBE3 791 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 RASGEF1CQ8N431 466 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 ARFGAP1Q8N6T3 406 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 UBL4BQ8N7F7 174 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 ZNF558Q96NG5 402 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 CARD9Q9H257 536 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 SMARCAL1Q9NZC9 954 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 EHD2Q9NZN4 543 aa22.52■■□□□ 1.2
CEACAM3-203ENST00000415495 TADA3O75528 432 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 FLT3P36888 993 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 NDUFV1P49821 464 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 RNASE9P60153 205 aaKnown RBP22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 ADIGQ0VDE8 80 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 ZNF280DQ6N043 979 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 CC2D1AQ6P1N0 951 aaPredicted RBP22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 PSRC1Q6PGN9 363 aaPredicted RBP22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 C4orf50Q6ZRC1 276 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 ARCQ7LC44 396 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 GPRIN1Q7Z2K8 1008 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 COLGALT1Q8NBJ5 622 aa22.51■■□□□ 1.19
CEACAM3-203ENST00000415495 MNS1Q8NEH6 495 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms