RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 MAMLD1Q13495 774 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PTF1AQ7RTS3 328 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ACTL9Q8TC94 416 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 HELQQ8TDG4 1101 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 FHDC1Q9C0D6 1143 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ARMCX1Q9P291 453 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 HACL1Q9UJ83 578 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SYNPO2Q9UMS6 1093 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 MYH1P12882 1939 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 RGS2P41220 211 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SCYL2Q6P3W7 929 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PRUNE1Q86TP1 453 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 CHSY1Q86X52 802 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 LMO3Q8TAP4 145 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 RSAD1Q9HA92 442 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 GLRA2P23416 452 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 TM4SF1P30408 202 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SLC30A10Q6XR72 485 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 RIPOR1Q6ZS17 1223 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 RDM1Q8NG50 284 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 CEP70Q8NHQ1 597 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 DDI1Q8WTU0 396 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 UCMAQ8WVF2 138 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SLC7A3Q8WY07 619 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 NDNQ99608 321 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 FBXO6Q9NRD1 293 aaPredicted RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ATXN10Q9UBB4 475 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 DNAJC6O75061 913 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ENTPD3O75355 529 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 UPP2O95045 317 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 KRT19P08727 400 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 TAS2R40P59535 323 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PSMC1P62191 440 aaKnown RBP12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ESRRGP62508 458 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 ADRM1Q16186 407 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 LIN52Q52LA3 116 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 PRAMEF18Q5VWM3 479 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 RFWD3Q6PCD5 774 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 NDUFAF2Q8N183 169 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 AFAP1L2Q8N4X5 818 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 APOL6Q9BWW8 343 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 DTNAQ9Y4J8 743 aa12.09□□□□□ -0.47
SCN4B-202ENST00000415030 EDIL3O43854 480 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TMCC1O94876 653 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 MAPK6Q16659 721 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 NIPA1Q7RTP0 329 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 PTPRN2Q92932 1015 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 GPRC5CQ9NQ84 441 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 RAB6BQ9NRW1 208 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TAS2R1Q9NYW7 299 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TMCO1Q9UM00 188 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 COQ4Q9Y3A0 265 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 CCDC88AQ3V6T2 1871 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 CETPP11597 493 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
SCN4B-202ENST00000415030 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
SCN4B-202ENST00000415030 CPNE8Q86YQ8 564 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 FAM71DQ8N9W8 422 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 OR6Y1Q8NGX8 325 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 DENND1AQ8TEH3 1009 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 SEMA4DQ92854 862 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 PCSK1NQ9UHG2 260 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 IGLV3-22A0A075B6J6 115 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TBX10O75333 385 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TRPA1O75762 1119 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 TM7SF2O76062 418 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 IVDP26440 423 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 CCND2P30279 289 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 HSPA13P48723 471 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 CDK7P50613 346 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 NCOA4Q13772 614 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 ZNF394Q53GI3 561 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 UBAP2Q5T6F2 1119 aaKnown RBP12.08□□□□□ -0.48
SCN4B-202ENST00000415030 STRIP1Q5VSL9 837 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 KLC3Q6P597 504 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 C4orf22Q6V702 233 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 NKD2Q969F2 451 aaPredicted RBP12.08□□□□□ -0.48
SCN4B-202ENST00000415030 ZDHHC15Q96MV8 337 aa12.08□□□□□ -0.48
SCN4B-202ENST00000415030 A0A1B0GUL6 1792 aa12.07□□□□□ -0.48
SCN4B-202ENST00000415030 MTERF2Q49AM1 385 aa12.07□□□□□ -0.48
SCN4B-202ENST00000415030 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms