RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 RNF44Q7L0R7 432 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 BEND5Q7L4P6 421 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 DEPTORQ8TB45 409 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ATRIPQ8WXE1 791 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ATG4AQ8WYN0 398 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 RFKQ969G6 155 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 PPP2R3CQ969Q6 453 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 TNIP3Q96KP6 325 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 SGCZQ96LD1 299 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 NLRC4Q9NPP4 1024 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 FOXJ2Q9P0K8 574 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ING1Q9UK53 422 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 TBC1D30Q9Y2I9 924 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 A0A087X1B8 175 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 RAB27BO00194 218 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 CD3EAPO15446 510 aaKnown RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 KCNQ3O43525 872 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 NCK2O43639 380 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 AKAP8O43823 692 aaKnown RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLPIP03973 132 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 CHRM2P08172 466 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 PDHA1P08559 390 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 TPH1P17752 444 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 PRKAG1P54619 331 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 BCAT1P54687 386 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 BTKQ06187 659 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 BMPR2Q13873 1038 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 CCNIQ14094 377 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF169Q14929 603 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 TBCCQ15814 346 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 FAM209BQ5JX69 171 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 DGKKQ5KSL6 1271 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 KLHDC7AQ5VTJ3 777 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 HIBCHQ6NVY1 386 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 MAVSQ7Z434 540 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 SRLQ86TD4 932 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 LIX1LQ8IVB5 337 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 FAM186BQ8IYM0 893 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 SPARTQ8N0X7 666 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 ABRAQ8N0Z2 381 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 CCDC33Q8N5R6 958 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 ACTRT2Q8TDY3 377 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 SMCR8Q8TEV9 937 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF384Q8TF68 577 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 OSCP1Q8WVF1 389 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF668Q96K58 619 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 GDF15Q99988 308 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 TTPALQ9BTX7 342 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 EIF2AQ9BY44 585 aaKnown RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 TRMT13Q9NUP7 481 aaKnown RBP4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 EHD3Q9NZN3 535 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 FNIP2Q9P278 1114 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 SALL3Q9BXA9 1300 aa4.6□□□□□ -1.67
HMGB1P11-201ENST00000413899 A0A087WZ62 844 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZAR1LA6NP61 321 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 RAMP2O60895 175 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 ONECUT2O95948 504 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYL4P12829 197 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 PCSK6P29122 969 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 GRIA3P42263 894 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 MAPK10P53779 464 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 RHBDL3P58872 404 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 SP2Q02086 613 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 PMS2P11Q13670 270 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 PTCHD3Q3KNS1 767 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 CACHD1Q5VU97 1274 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 KAZNQ674X7 775 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 MZT2AQ6P582 158 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 USP17L6PQ6QN14 398 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 KCTD20Q7Z5Y7 419 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 IZUMO1Q8IYV9 350 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 FANCBQ8NB91 859 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 DNAJB14Q8TBM8 379 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 SOCS4Q8WXH5 440 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 TFAP2BQ92481 460 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 RSPRY1Q96DX4 576 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 GBA2Q9HCG7 927 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 LRIT1Q9P2V4 623 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 SNX14Q9Y5W7 946 aa4.59□□□□□ -1.67
HMGB1P11-201ENST00000413899 SRGAP2O75044 1071 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 PIAS2O75928 621 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 URI1O94763 535 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 TJP3O95049 919 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 RASAL1O95294 804 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 IL6RP08887 468 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZFXP17010 805 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 ADORA2AP29274 412 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 SERPINB3P29508 390 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 RARRES1P49788 294 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 COPAP53621 1224 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 COL10A1Q03692 680 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 MORC3Q14149 939 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 BRD3Q15059 726 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 ARL13BQ3SXY8 428 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 PLAC9Q5JTB6 97 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 ZNF551Q7Z340 670 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 PEG10Q86TG7 708 aaKnown RBP4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 MORC1Q86VD1 984 aa4.58□□□□□ -1.68
HMGB1P11-201ENST00000413899 CYP2W1Q8TAV3 490 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms