RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 GPR158Q5T848 1215 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 STPG1Q5TH74 334 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TCEAL6Q6IPX3 200 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 HAUS6Q7Z4H7 955 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 SFR1Q86XK3 245 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 CEP57L1Q8IYX8 460 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ATAD1Q8NBU5 361 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TMEM161BQ8NDZ6 487 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 BPIFB1Q8TDL5 484 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 GAB3Q8WWW8 586 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TCEAL3Q969E4 200 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 CHFRQ96EP1 664 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 DUSP9Q99956 384 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 LPIN3Q9BQK8 851 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 HAPLN2Q9GZV7 340 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 SMG9Q9H0W8 520 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ATXN3LQ9H3M9 355 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TMPRSS4Q9NRS4 437 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 POLR3BQ9NW08 1133 aaPredicted RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 STIM2Q9P246 746 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 VTI1BQ9UEU0 232 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 MAP4K5Q9Y4K4 846 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZFYVE26Q68DK2 2539 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ATRXP46100 2492 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 A0A1B0GVL5 298 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 OR6C75A6NL08 312 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 PRPF40AO75400 957 aaKnown RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 TOM1L1O75674 476 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZNF806P0C7X5 589 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 CCDC192P0DO97 292 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 GAP43P17677 238 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ATF6P18850 670 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 SCP2P22307 547 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 NMT1P30419 496 aaKnown RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ABCD1P33897 745 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 MPLP40238 635 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 RAP1GAPP47736 663 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ALDH1A3P47895 512 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 LIG4P49917 911 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 AMPD3Q01432 767 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 DHX9Q08211 1270 aaKnown RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 EHHADHQ08426 723 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 PSMD2Q13200 908 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 GPR17Q13304 367 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 OVOS1Q6IE37 1185 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 CENPPQ6IPU0 288 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 FSTL4Q6MZW2 842 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 DNAJB7Q7Z6W7 309 aaPredicted RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 USP37Q86T82 979 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 CCDC65Q8IXS2 484 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 FSIP1Q8NA03 581 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 OR10T2Q8NGX3 314 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 PSMG2Q969U7 264 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 HHIPQ96QV1 700 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 SEPT5Q99719 369 aaPredicted RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 MRPL44Q9H9J2 332 aaKnown RBP8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 ETNK1Q9HBU6 452 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 HPS4Q9NQG7 708 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 OBP2AQ9NY56 170 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 TBC1D7Q9P0N9 293 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 SEL1LQ9UBV2 794 aa8.9□□□□□ -0.98
UPF3AP1-201ENST00000413731 LAMA1P25391 3075 aa8.9□□□□□ -0.99
UPF3AP1-201ENST00000413731 MYOFQ9NZM1 2061 aa8.9□□□□□ -0.99
UPF3AP1-201ENST00000413731 CEP192Q8TEP8 1941 aa8.9□□□□□ -0.99
UPF3AP1-201ENST00000413731 PLXND1Q9Y4D7 1925 aa8.9□□□□□ -0.99
UPF3AP1-201ENST00000413731 CACNA1EQ15878 2313 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 GON4LQ3T8J9 2241 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 MYO18AQ92614 2054 aaKnown RBP8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 TTC26A0AVF1 554 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 OTOL1A6NHN0 477 aaPredicted RBP8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 FZD6O60353 706 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 KCNK5O95279 499 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 GCNT3O95395 438 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 TYMPP19971 482 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 CMA1P23946 247 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 SYKP43405 635 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 AFMP43652 599 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 PPP2R3AQ06190 1150 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 MCL1Q07820 350 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 MYBPC2Q14324 1141 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 ITPRIPL2Q3MIP1 535 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 ARHGAP15Q53QZ3 475 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 TMEM196Q5HYL7 178 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 PLA2G2CQ5R387 149 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 NAIF1Q69YI7 327 aaPredicted RBP8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 TRIM68Q6AZZ1 485 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 ADALQ6DHV7 355 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 PSAPL1Q6NUJ1 521 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 ZPBP2Q6X784 338 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 DSTYKQ6XUX3 929 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 CACNA2D4Q7Z3S7 1137 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 CYP2U1Q7Z449 544 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 SLC9A9Q8IVB4 645 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 SYNPOQ8N3V7 929 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 RIN3Q8TB24 985 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 DNAJC19Q96DA6 116 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 LOXL4Q96JB6 756 aa8.89□□□□□ -0.99
UPF3AP1-201ENST00000413731 NTPCRQ9BSD7 190 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms