RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 NPR3P17342 541 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 PTMSP20962 102 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 SP100P23497 879 aaPredicted RBP6.78□□□□□ -1.32
USP54-202ENST00000413442 FCARP24071 287 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ACAT1P24752 427 aaKnown RBP6.78□□□□□ -1.32
USP54-202ENST00000413442 PLA2G5P39877 138 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ASPAP45381 313 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 FMO5P49326 533 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 NDST1P52848 882 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 SNX16P57768 344 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 GCNT1Q02742 428 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 LRRC32Q14392 662 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 DDR2Q16832 855 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ITPRIPL2Q3MIP1 535 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 CCDC40Q4G0X9 1142 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 MDH1BQ5I0G3 518 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 TCERG1LQ5VWI1 586 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ARHGAP17Q68EM7 881 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 KLHDC10Q6PID8 442 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
USP54-202ENST00000413442 VITQ6UXI7 678 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 OSTM1Q86WC4 334 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 CCDC105Q8IYK2 499 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 SCML4Q8N228 414 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 NELFBQ8WX92 580 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 RSAD2Q8WXG1 361 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 SLC35C1Q96A29 364 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 MYLPFQ96A32 169 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 TCEAL4Q96EI5 215 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 CYFIP2Q96F07 1278 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 SRRTQ9BXP5 876 aaKnown RBP6.78□□□□□ -1.32
USP54-202ENST00000413442 DUSP16Q9BY84 665 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 B3GNT5Q9BYG0 378 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 TLR8Q9NR97 1041 aaKnown RBP6.78□□□□□ -1.32
USP54-202ENST00000413442 CLIC5Q9NZA1 410 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 ARHGAP26Q9UNA1 814 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.78□□□□□ -1.32
USP54-202ENST00000413442 MIA3Q5JRA6 1907 aa6.78□□□□□ -1.32
USP54-202ENST00000413442 OBSL1O75147 1896 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 KMT2EQ8IZD2 1858 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 E2F8A0AVK6 867 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 KRBA1A5PL33 1030 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ZNF840PA6NDX5 716 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FAM170BA6NMN3 283 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 F8VP50 259 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TNFRSF10BO14763 440 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ATP2C2O75185 946 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GADD45BO75293 160 aaPredicted RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 OLFM2O95897 454 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 AFPP02771 609 aaKnown RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 ZDHHC11BP0C7U3 371 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FAM200BP0CF97 657 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 VDRP11473 427 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GDI1P31150 447 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 HOXA6P31267 233 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CNR2P34972 360 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 EIF2DP41214 584 aaKnown RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 MFAP3P55082 362 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CDH8P55286 799 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GOLGA8FQ08AF8 430 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GOLGA8DPQ0D2H9 430 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 KCNH2Q12809 1159 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 RUNX3Q13761 415 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TPD52L1Q16890 204 aaPredicted RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 HECTD3Q5T447 861 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TMEM150AQ86TG1 271 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 C1orf210Q8IVY1 113 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TRIM59Q8IWR1 403 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FUKQ8N0W3 1084 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 MAB21L3Q8N8X9 362 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ANKRD52Q8NB46 1076 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FLCNQ8NFG4 579 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 PJA1Q8NG27 643 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 KCNV2Q8TDN2 545 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TAS1R2Q8TE23 839 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ING5Q8WYH8 240 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FAM3CQ92520 227 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ATP2A3Q93084 1043 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CHAMP1Q96JM3 812 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 HEXIM2Q96MH2 286 aaKnown RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 ZSWIM3Q96MP5 696 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 NT5C1BQ96P26 610 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 KXD1Q9BQD3 176 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 LPIN3Q9BQK8 851 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 FAM83CQ9BQN1 747 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 MED10Q9BTT4 135 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 RPP25Q9BUL9 199 aaKnown RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 TRIM62Q9BVG3 475 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 NUP62CLQ9H1M0 184 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CLSTN2Q9H4D0 955 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 THAP9Q9H5L6 903 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 TBC1D17Q9HA65 648 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 LTB4R2Q9NPC1 389 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CYLDQ9NQC7 956 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GKN1Q9NS71 199 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 CISHQ9NSE2 258 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 GCNT4Q9P109 453 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms