RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 SMARCB1Q12824 385 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 PTP4A2Q12974 167 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 TPGS2Q68CL5 300 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 LLGL2Q6P1M3 1020 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 MMS22LQ6ZRQ5 1243 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 GPRIN1Q7Z2K8 1008 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 SPPL2BQ8TCT7 592 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 ABCB6Q9NP58 842 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 ATP8B3O60423 1300 aa27.4■■□□□ 1.98
RHBDD3-203ENST00000413137 RCCD1A6NED2 376 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 XPO1O14980 1071 aaKnown RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 PER2O15055 1255 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 RTN2O75298 545 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 SETSIPP0DME0 302 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 HAPLN1P10915 354 aaPredicted RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 GRIK1P39086 918 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 NSFP46459 744 aaKnown RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 PLA2G4AP47712 749 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 MGAT5BQ3V5L5 792 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 LILRA6Q6PI73 481 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 PHLDB2Q86SQ0 1253 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 SCN4BQ8IWT1 228 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 GPR152Q8TDT2 470 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 C2orf15Q8WU43 125 aaKnown RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 SEPT5Q99719 369 aaPredicted RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 C11orf70Q9BRQ4 267 aa27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 DMAP1Q9NPF5 467 aaPredicted RBP27.39■■□□□ 1.98
RHBDD3-203ENST00000413137 PTPRDP23468 1912 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 ERBB2P04626 1255 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 ADH1AP07327 375 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 MMP8P22894 467 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 MAGEA1P43355 309 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 SPA17Q15506 151 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 CYP4A22Q5TCH4 519 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 MON1BQ7L1V2 547 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 RBM23Q86U06 439 aaKnown RBP27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 PHF13Q86YI8 300 aaPredicted RBP27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 PPP1R13BQ96KQ4 1090 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 SLC4A5Q9BY07 1137 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 CYP4F11Q9HBI6 524 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 ST7Q9NRC1 585 aa27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 CHORDC1Q9UHD1 332 aaPredicted RBP27.39■■□□□ 1.97
RHBDD3-203ENST00000413137 CLASP2O75122 1294 aaKnown RBP27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 MAGEA11P43364 429 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 GALCP54803 685 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 PDE12Q6L8Q7 609 aaKnown RBP27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 VSTM1Q6UX27 236 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 ERICH1Q86X53 443 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 MCOLN2Q8IZK6 566 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 TRIM44Q96DX7 344 aaPredicted RBP27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 LRCH3Q96II8 777 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 LMAN2LQ9H0V9 348 aa27.38■■□□□ 1.97
RHBDD3-203ENST00000413137 ABCB4P21439 1286 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 CLCN4P51793 760 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 HS1BP3Q53T59 392 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 STK32AQ8WU08 396 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 THAP2Q9H0W7 228 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 ADAM22Q9P0K1 906 aa27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 COL4A4P53420 1690 aaPredicted RBP27.37■■□□□ 1.97
RHBDD3-203ENST00000413137 E5RJQ4 531 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 ATMINO43313 823 aaPredicted RBP27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 ABL1P00519 1130 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 ATF6P18850 670 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 RPL34P49207 117 aaKnown RBP27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 SLC8A3P57103 927 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 ARHGEF26Q96DR7 871 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 PRDM12Q9H4Q4 367 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 ATG2AQ2TAZ0 1938 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 SZT2Q5T011 3432 aa27.36■■□□□ 1.97
RHBDD3-203ENST00000413137 LCP1P13796 627 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 GRIN2CQ14957 1233 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 TMEM110Q86TL2 294 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 C8orf48Q96LL4 319 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 LACRTQ9GZZ8 138 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 TNFRSF10BO14763 440 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 H2AFZP0C0S5 128 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 KRT83P78385 493 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 RBM10P98175 930 aaKnown RBP27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 H2AFVQ71UI9 128 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 SCUBE3Q8IX30 993 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 TCEAL8Q8IYN2 117 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 C17orf53Q8N3J3 647 aaPredicted RBP27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 SCAMP5Q8TAC9 235 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 CLEC4CQ8WTT0 213 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 KCTD13Q8WZ19 329 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 NDRG1Q92597 394 aaKnown RBP27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 MRPL38Q96DV4 380 aaKnown RBP27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 HSFY1Q96LI6 401 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 UBXN6Q9BZV1 441 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 FBXW11Q9UKB1 542 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 PPP2R2CQ9Y2T4 447 aa27.35■■□□□ 1.97
RHBDD3-203ENST00000413137 IPO7O95373 1038 aaKnown RBP27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 GLUD1P00367 558 aa27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 EPCAMP16422 314 aa27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 RRM1P23921 792 aa27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 GABRB2P47870 512 aa27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 C1QBPQ07021 282 aaKnown RBP27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 ADIGQ0VDE8 80 aa27.34■■□□□ 1.97
RHBDD3-203ENST00000413137 RAB41Q5JT25 222 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms