RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 KRT31Q15323 416 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 EXOC3L4Q17RC7 722 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 IER5LQ5T953 404 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 TRIM65Q6PJ69 517 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 GPRIN1Q7Z2K8 1008 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 ARID3BQ8IVW6 561 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-202ENST00000411739 LEMD2Q8NC56 503 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 EDAQ92838 391 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 SPATA17Q96L03 361 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 HNRNPABQ99729 332 aaKnown RBP12.69□□□□□ -0.38
NEDD1-202ENST00000411739 ACP6Q9NPH0 428 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 C11orf16Q9NQ32 467 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 C2orf78A6NCI8 922 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 FAM200BP0CF97 657 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 KRT5P13647 590 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 TBXAS1P24557 533 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-202ENST00000411739 PGFP49763 221 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 GPC5P78333 572 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 KCNMA1Q12791 1236 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 TAF10Q12962 218 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 CLEC20AQ6ZU45 233 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 UBA3Q8TBC4 463 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 TFAP2BQ92481 460 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 LRRC3BQ96PB8 259 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 GCNAQ96QF7 691 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 SLC22A12Q96S37 553 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 FUCA2Q9BTY2 467 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 HSD3B7Q9H2F3 369 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 DMAP1Q9NPF5 467 aaPredicted RBP12.69□□□□□ -0.38
NEDD1-202ENST00000411739 IGSF9Q9P2J2 1179 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
NEDD1-202ENST00000411739 MYH10P35580 1976 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 TULP2O00295 520 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 PRAMEF12O95522 483 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 PDGFBP01127 241 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 PNMA6AP0CW24 399 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 BRD2P25440 801 aaKnown RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 CDC25CP30307 473 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 USP8P40818 1118 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 KLK7P49862 253 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 SLC5A3P53794 718 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 ARHGAP15Q53QZ3 475 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 DHX40Q8IX18 779 aaKnown RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 SMARCD2Q92925 531 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 SIX2Q9NPC8 291 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 ZFP37Q9Y6Q3 630 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 MICAL2O94851 1124 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 EEF1GP26641 437 aaKnown RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 GOLGA7BQ2TAP0 167 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 RBBP8NLQ8NC74 664 aaPredicted RBP12.68□□□□□ -0.38
NEDD1-202ENST00000411739 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 ZFP14Q9HCL3 533 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 CCL26Q9Y258 94 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 TECTAO75443 2155 aa12.68□□□□□ -0.38
NEDD1-202ENST00000411739 TNFRSF10BO14763 440 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 TRIM21P19474 475 aaKnown RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 YWHAEP62258 255 aaKnown RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 ZSCAN23Q3MJ62 389 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 VITQ6UXI7 678 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 TRIM67Q6ZTA4 783 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 TTC30AQ86WT1 665 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 ARL14EPQ8N8R7 260 aaPredicted RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 MRPS31Q92665 395 aaKnown RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 TRMT2BQ96GJ1 504 aaKnown RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 DUSP16Q9BY84 665 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 TSPAN16Q9UKR8 245 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 CA14Q9ULX7 337 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 FAM170AA1A519 330 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 HEPACAM2A8MVW5 462 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 HHLA1C9JL84 531 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 YWHAQP27348 245 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 ZNF165P49910 485 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 GCNT1Q02742 428 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 SGO2Q562F6 1265 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 DPY19L2P1Q6NXN4 242 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 MTSS1LQ765P7 747 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 ZFYVE19Q96K21 471 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 LSM14BQ9BX40 385 aaKnown RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 CSNK1G1Q9HCP0 422 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
NEDD1-202ENST00000411739 APEX2Q9UBZ4 518 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 GREB1Q4ZG55 1949 aa12.67□□□□□ -0.38
NEDD1-202ENST00000411739 PIK3R2O00459 728 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 FGF19O95750 216 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 NPR3P17342 541 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
NEDD1-202ENST00000411739 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 TTC39CQ8N584 583 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 TTC8Q8TAM2 541 aa12.66□□□□□ -0.38
NEDD1-202ENST00000411739 RIN3Q8TB24 985 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms