RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MCRS1Q96EZ8 462 aa17.46■□□□□ 0.39
LIMS2-208ENST00000410011 ANKRD36BP1Q96IX9 119 aa17.46■□□□□ 0.39
LIMS2-208ENST00000410011 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
LIMS2-208ENST00000410011 TRIM55Q9BYV6 548 aa17.46■□□□□ 0.39
LIMS2-208ENST00000410011 CYTH4Q9UIA0 394 aa17.46■□□□□ 0.39
LIMS2-208ENST00000410011 XPO7Q9UIA9 1087 aaKnown RBP17.46■□□□□ 0.39
LIMS2-208ENST00000410011 MCF2LO15068 1137 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 PRKCBP05771 671 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 EIF3EP60228 445 aaKnown RBP17.46■□□□□ 0.38
LIMS2-208ENST00000410011 EFTUD2Q15029 972 aaKnown RBP eCLIP17.46■□□□□ 0.38
LIMS2-208ENST00000410011 TEX9Q8N6V9 391 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 KCTD6Q8NC69 237 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 SLC44A1Q8WWI5 657 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 POLIQ9UNA4 740 aa17.46■□□□□ 0.38
LIMS2-208ENST00000410011 MTO1Q9Y2Z2 717 aaKnown RBP17.46■□□□□ 0.38
LIMS2-208ENST00000410011 KLF11O14901 512 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 CCDC22O60826 627 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 TRUB2O95900 331 aaKnown RBP17.45■□□□□ 0.38
LIMS2-208ENST00000410011 MT-ND3P03897 115 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 MARK3P27448 753 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 NEK3P51956 506 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 DYNLT1P63172 113 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 TFAMQ00059 246 aaKnown RBP17.45■□□□□ 0.38
LIMS2-208ENST00000410011 LAMTOR4Q0VGL1 99 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 SMTNL2Q2TAL5 461 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 KCNT1Q5JUK3 1230 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 MPZL3Q6UWV2 235 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 MTDHQ86UE4 582 aaKnown RBP17.45■□□□□ 0.38
LIMS2-208ENST00000410011 NPHS2Q9NP85 383 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 TEX264Q9Y6I9 313 aa17.45■□□□□ 0.38
LIMS2-208ENST00000410011 TCRBV7S3A2A0A539 114 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 RNF8O76064 485 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 IL18RAPO95256 599 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 CBX6O95503 412 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 RBP3P10745 1247 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 RAD23BP54727 409 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 FAM91A1Q658Y4 838 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 METTL7BQ6UX53 244 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 APBB2Q92870 758 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 MRRFQ96E11 262 aaKnown RBP17.44■□□□□ 0.38
LIMS2-208ENST00000410011 CPXM1Q96SM3 734 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 NKX1-2Q9UD57 310 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-208ENST00000410011 ACKR2O00590 384 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 CHADO15335 359 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 MIPP30301 263 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 GCKP35557 465 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 FSTL1Q12841 308 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 NOMO1Q15155 1222 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 BBS9Q3SYG4 887 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 SH3D19Q5HYK7 790 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 NAF1Q96HR8 494 aaKnown RBP17.44■□□□□ 0.38
LIMS2-208ENST00000410011 APOPT1Q96IL0 206 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 CAMKK2Q96RR4 588 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 FZD8Q9H461 694 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-208ENST00000410011 DCLRE1BQ9H816 532 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 ASNSD1Q9NWL6 643 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 CNTN3Q9P232 1028 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
LIMS2-208ENST00000410011 LPXNO60711 386 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 CD48P09326 243 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 GM2AP17900 193 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 EPHB2P29323 1055 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ZNF200P98182 395 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 CNTN2Q02246 1040 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 BLMHQ13867 455 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 KCNJ11Q14654 390 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 KRT72Q14CN4 511 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 PRKD1Q15139 912 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 FAM47CQ5HY64 1035 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 RFX6Q8HWS3 928 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 FAM71DQ8N9W8 422 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 SPATA18Q8TC71 538 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 TSSK1BQ9BXA7 367 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 VRTNQ9H8Y1 702 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 SLC17A7Q9P2U7 560 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 TCRBV9S1A1TA0A576 114 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ERBB2P04626 1255 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 CD19P15391 556 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 TCF7P36402 384 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 TFDP2Q14188 446 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ZNF667Q5HYK9 610 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 MICALL2Q8IY33 904 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 RNF149Q8NC42 400 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 RTP4Q96DX8 246 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 PTCD3Q96EY7 689 aaKnown RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 NUDCD1Q96RS6 583 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 C10orf88Q9H8K7 445 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 KCNK13Q9HB14 408 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 CYP3A43Q9HB55 503 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 METTL5Q9NRN9 209 aaKnown RBP17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ZNF180Q9UJW8 692 aa17.43■□□□□ 0.38
LIMS2-208ENST00000410011 ITGBL1O95965 494 aaPredicted RBP17.42■□□□□ 0.38
LIMS2-208ENST00000410011 HMGCRP04035 888 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ELK3P41970 407 aa17.42■□□□□ 0.38
LIMS2-208ENST00000410011 ZNF143P52747 638 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms