RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 LRRC27Q9C0I9 530 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 IKZF4Q9H2S9 585 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 KIAA1586Q9HCI6 787 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 TBC1D7Q9P0N9 293 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 GCNT4Q9P109 453 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
SERF2-210ENST00000409960 WNT6Q9Y6F9 365 aa12.59□□□□□ -0.39
SERF2-210ENST00000409960 MORC2Q9Y6X9 1032 aaPredicted RBP12.59□□□□□ -0.39
SERF2-210ENST00000409960 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
SERF2-210ENST00000409960 ZNF233A6NK53 670 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 SLC9A3R1O14745 358 aaPredicted RBP12.58□□□□□ -0.4
SERF2-210ENST00000409960 TRIM66O15016 1216 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 KCNK5O95279 499 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CAVIN2O95810 425 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 HOXB1P14653 301 aaPredicted RBP12.58□□□□□ -0.4
SERF2-210ENST00000409960 HOXC13P31276 330 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 GBP1P32455 592 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 STAT6P42226 847 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 DGKEP52429 567 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 WNT7BP56706 349 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CREB5Q02930 508 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 DUOXA2Q1HG44 320 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 HSF5Q4G112 596 aaPredicted RBP12.58□□□□□ -0.4
SERF2-210ENST00000409960 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 DENND5BQ6ZUT9 1274 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 STKLD1Q8NE28 680 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 TTC16Q8NEE8 873 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 NOC3LQ8WTT2 800 aaKnown RBP12.58□□□□□ -0.4
SERF2-210ENST00000409960 NUP205Q92621 2012 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 SLC22A12Q96S37 553 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CYP2S1Q96SQ9 504 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 EDEM2Q9BV94 578 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CEP295Q9C0D2 2601 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 PDE11AQ9HCR9 933 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 RXFP3Q9NSD7 469 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 PANK4Q9NVE7 773 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 SIX4Q9UIU6 781 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 CLIC4Q9Y696 253 aa12.58□□□□□ -0.4
SERF2-210ENST00000409960 PTPRDP23468 1912 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 C2orf78A6NCI8 922 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 GOLGA8JA6NMD2 632 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 ALDH1A2O94788 518 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 GRIK1P39086 918 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 EIF2DP41214 584 aaKnown RBP12.57□□□□□ -0.4
SERF2-210ENST00000409960 CASP5P51878 434 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 NOP14P78316 857 aaKnown RBP12.57□□□□□ -0.4
SERF2-210ENST00000409960 MRPS21P82921 87 aaKnown RBP12.57□□□□□ -0.4
SERF2-210ENST00000409960 LIMS2Q7Z4I7 341 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 OSTM1Q86WC4 334 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 RASSF3Q86WH2 238 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 DDX42Q86XP3 938 aaKnown RBP eCLIP12.57□□□□□ -0.4
SERF2-210ENST00000409960 WDR49Q8IV35 697 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 USP33Q8TEY7 942 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 CNOT6LQ96LI5 555 aaKnown RBP12.57□□□□□ -0.4
SERF2-210ENST00000409960 TTLL2Q9BWV7 592 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
SERF2-210ENST00000409960 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
SERF2-210ENST00000409960 WARSP23381 471 aaKnown RBP12.56□□□□□ -0.4
SERF2-210ENST00000409960 DPP6P42658 865 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 SLC7A9P82251 487 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 PMS2CLQ68D20 193 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 LMBRD2Q68DH5 695 aaPredicted RBP12.56□□□□□ -0.4
SERF2-210ENST00000409960 ZSWIM2Q8NEG5 633 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 KBTBD7Q8WVZ9 684 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 EZH1Q92800 747 aaPredicted RBP12.56□□□□□ -0.4
SERF2-210ENST00000409960 MYLPFQ96A32 169 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 SLITRK1Q96PX8 696 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 MMS19Q96T76 1030 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 MMP17Q9ULZ9 603 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
SERF2-210ENST00000409960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 LEFTY2O00292 366 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 EIF3DO15371 548 aaKnown RBP eCLIP12.55□□□□□ -0.4
SERF2-210ENST00000409960 TACC1O75410 805 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 BDNFP23560 247 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 OPRD1P41143 372 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 NOVA1P51513 510 aaKnown RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 PSMC1P62191 440 aaKnown RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 AMPD3Q01432 767 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 CUL4AQ13619 759 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 CRY1Q16526 586 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 PREPLQ4J6C6 727 aaPredicted RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 LCE2DQ5TA82 110 aaPredicted RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 TDRD10Q5VZ19 366 aaKnown RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
SERF2-210ENST00000409960 PSAPL1Q6NUJ1 521 aa12.55□□□□□ -0.4
SERF2-210ENST00000409960 CYP2U1Q7Z449 544 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms