RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CDC14AQ9UNH5 594 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RBMX2Q9Y388 322 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MDC1Q14676 2089 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 FRAS1Q86XX4 4008 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SEMA3EO15041 775 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PJA2O43164 708 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ORC4O43929 436 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CEP104O60308 925 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SPAG7O75391 227 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ADRA1DP25100 572 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MLLT3P42568 568 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PTPRRQ15256 657 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ANKRD1Q15327 319 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 TMEM266Q2M3C6 531 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CFAP58Q5T655 872 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ALS2CLQ60I27 953 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 NANOGP8Q6NSW7 305 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 EMBQ6PCB8 327 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MAMSTRQ6ZN01 415 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 NEK10Q6ZWH5 1172 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 OTOAQ7RTW8 1153 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CLNKQ7Z7G1 428 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SIAH1Q8IUQ4 282 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CEP112Q8N8E3 955 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MAPK15Q8TD08 544 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 OSBPL6Q9BZF3 934 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CDC42EP4Q9H3Q1 356 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF358Q9NW07 568 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SEC63Q9UGP8 760 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DCTN4Q9UJW0 460 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CEP131Q9UPN4 1083 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RAI2Q9Y5P3 530 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 WDR91A4D1P6 747 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 STX16-NPEPL1H3BU86 382 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 FOXN3O00409 490 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 UNC5CO95185 931 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ASMTLO95671 621 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 VCAM1P19320 739 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CTNNA1P35221 906 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SERPINB4P48594 390 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ATXN3P54252 364 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PPP2R2AP63151 447 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CHRNDQ07001 517 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DBPQ10586 325 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 BFSP2Q13515 415 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 HLTFQ14527 1009 aaKnown RBP eCLIP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DRAP1Q14919 205 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 TGFBIQ15582 683 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SNX30Q5VWJ9 437 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 KLHL35Q6PF15 583 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 XKR5Q6UX68 686 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 FBXO33Q7Z6M2 555 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CNGA4Q8IV77 575 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 NUP93Q8N1F7 819 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 NCOA7Q8NI08 942 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ESR2Q92731 530 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DDX12PQ92771 950 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MRRFQ96E11 262 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SAAL1Q96ER3 474 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CHMP6Q96FZ7 201 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DHTKD1Q96HY7 919 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MAML3Q96JK9 1138 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MOV10L1Q9BXT6 1211 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 AZI2Q9H6S1 392 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SLC38A7Q9NVC3 462 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 IL1RAPL1Q9NZN1 696 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SRRM3A6NNA2 597 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SP9P0CG40 484 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ADSSP30520 456 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CDC16Q13042 620 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 OLIG2Q13516 323 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RRP1BQ14684 758 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PDK1Q15118 436 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CNPY1Q3B7I2 92 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CCDC178Q5BJE1 867 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 C6orf183Q5T699 404 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RNF20Q5VTR2 975 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CYHR1Q6ZMK1 362 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RAPH1Q70E73 1250 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PDZD3Q86UT5 571 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SRRM1Q8IYB3 904 aaKnown RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 GSTCDQ8NEC7 633 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 KLHL29Q96CT2 875 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MXRA8Q9BRK3 442 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 RHOBTB2Q9BYZ6 727 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MUC3BQ9H195 1237 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SOX17Q9H6I2 414 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SIAEQ9HAT2 523 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 BMP2KQ9NSY1 1161 aaPredicted RBP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 VPS51Q9UID3 782 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.3□□□□□ -1.88
RGPD3-202ENST00000409886 SPO11Q9Y5K1 396 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 MXRA5Q9NR99 2828 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PTPRJQ12913 1337 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 C7orf72A4D263 438 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 CLIC2O15247 247 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 ZBED4O75132 1171 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 PHF2O75151 1096 aa3.3□□□□□ -1.88
RGPD3-202ENST00000409886 FUCA1P04066 466 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms