RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 GOLGA8SH3BPF8 625 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 FSCN2O14926 492 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PAPSS1O43252 624 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 FGGP02679 453 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CLTBP09497 229 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 NPR3P17342 541 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ACAT1P24752 427 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ADORA2BP29275 332 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CYP2C18P33260 490 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PTPN7P35236 360 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF143P52747 638 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLC6A3Q01959 620 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLC25A11Q02978 314 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF211Q13398 564 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SIX1Q15475 284 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CYP1B1Q16678 543 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC142Q17RM4 750 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 MDH1BQ5I0G3 518 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 INTS6LQ5JSJ4 861 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 AADACL2Q6P093 401 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CNKSR3Q6P9H4 555 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CLEC20AQ6ZU45 233 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLC26A9Q7LBE3 791 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ARFGAP1Q8N6T3 406 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 C12orf50Q8NA57 414 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 EXD1Q8NHP7 514 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PIWIL1Q96J94 861 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 TMEM175Q9BSA9 504 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SYNCQ9H7C4 482 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CSNK1G1Q9HCP0 422 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PCDHB7Q9Y5E2 793 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 F8VP50 259 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 F8W810 466 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 LRCH4O75427 683 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 RHOXF2BP0C7M4 288 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 TNFRSF8P28908 595 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 RGS7P49802 495 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 LBX1P52954 281 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 BRD3Q15059 726 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PPP2R5EQ16537 467 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 LRRC26Q2I0M4 334 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 RAB41Q5JT25 222 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 FAM102AQ5T9C2 384 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 DAB2IPQ5VWQ8 1189 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CC2D1AQ6P1N0 951 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 FAM35AQ86V20 835 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 METTL23Q86XA0 190 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLC13A5Q86YT5 568 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 HNRNPLLQ8WVV9 542 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PCED1BQ96HM7 432 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 RHOXF2Q9BQY4 288 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 LRRC1Q9BTT6 524 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 C11orf84Q9BUA3 381 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PLVAPQ9BX97 442 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 MRPL9Q9BYD2 267 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLITRK6Q9H5Y7 841 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 NRDE2Q9H7Z3 1164 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 DNAJB4Q9UDY4 337 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 MYBPHLA2RUH7 354 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC151A5D8V7 595 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 HHLA1C9JL84 531 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 I3L4J1 428 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 KRIT1O00522 736 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 BEST1O76090 585 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 OAZ2O95190 189 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 EFEMP2O95967 443 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 TCF4P15884 667 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 GPD1P21695 349 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PSMA2P25787 234 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PCK1P35558 622 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CTCFP49711 727 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CCL23P55773 120 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ADCY1Q08828 1119 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 KLF1Q13351 362 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 LONRF2Q1L5Z9 754 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 OR6B2Q6IFH4 312 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 C8orf74Q6P047 294 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PIGZQ86VD9 579 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ZDHHC14Q8IZN3 488 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 OR10T2Q8NGX3 314 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 MYCBPQ99417 103 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 PPP1R12CQ9BZL4 782 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ST7Q9NRC1 585 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 ASNSD1Q9NWL6 643 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 MARCH5Q9NX47 278 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 DDX56Q9NY93 547 aaKnown RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 NR2E1Q9Y466 385 aa5.8□□□□□ -1.48
EPHA4-202ENST00000409854 TIMM13Q9Y5L4 95 aaPredicted RBP5.8□□□□□ -1.48
EPHA4-202ENST00000409854 CLDN5O00501 218 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 SYN3O14994 580 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 KIAA0355O15063 1070 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 FAM200BP0CF97 657 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 MCM3P25205 808 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 PTPN9P43378 593 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 CLCN6P51797 869 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 RNASE9P60153 205 aaKnown RBP5.79□□□□□ -1.48
EPHA4-202ENST00000409854 COPS2P61201 443 aa5.79□□□□□ -1.48
EPHA4-202ENST00000409854 VSNL1P62760 191 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms