RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CLEC20AQ6ZU45 233 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 DENND5BQ6ZUT9 1274 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 ZSWIM3Q96MP5 696 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 DNAI2Q9GZS0 605 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 MAGED2Q9UNF1 606 aaPredicted RBP23.71■■□□□ 1.39
PTCD3-203ENST00000409783 HHLA1C9JL84 531 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 PES1O00541 588 aaKnown RBP23.7■■□□□ 1.38
PTCD3-203ENST00000409783 ASGR2P07307 311 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 PAEPP09466 180 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 FAM200BP0CF97 657 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 CDC25CP30307 473 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 HTR4Q13639 388 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 STXBP5Q5T5C0 1151 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 ENOSF1Q7L5Y1 443 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 RBBP8NLQ8NC74 664 aaPredicted RBP23.7■■□□□ 1.38
PTCD3-203ENST00000409783 TFAP2BQ92481 460 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 ZSWIM1Q9BR11 485 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 ATXN3LQ9H3M9 355 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 IL37Q9NZH6 218 aa23.7■■□□□ 1.38
PTCD3-203ENST00000409783 NUP210Q8TEM1 1887 aaPredicted RBP23.69■■□□□ 1.38
PTCD3-203ENST00000409783 BECN2A8MW95 431 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 VDRP11473 427 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 CDK11BP21127 795 aaKnown RBP23.69■■□□□ 1.38
PTCD3-203ENST00000409783 MFAP3P55082 362 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 MAP3K7CLP57077 242 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 CYP4F8P98187 520 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 PARM1Q6UWI2 310 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 ST13P5Q8NFI4 369 aaPredicted RBP23.69■■□□□ 1.38
PTCD3-203ENST00000409783 RSAD2Q8WXG1 361 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 SHC3Q92529 594 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 FGF14Q92915 247 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 FAM81BQ96LP2 452 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 DUSP16Q9BY84 665 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 KCNK12Q9HB15 430 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 UXTQ9UBK9 157 aaPredicted RBP23.69■■□□□ 1.38
PTCD3-203ENST00000409783 MUTYHQ9UIF7 546 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 KIAA1257Q9ULG3 409 aa23.69■■□□□ 1.38
PTCD3-203ENST00000409783 LGALS16A8MUM7 142 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 O00370 1275 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 CALCAP01258 141 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 NPR3P17342 541 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 FCARP24071 287 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 SGO2Q562F6 1265 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 FAM78AQ5JUQ0 283 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 KLHDC7AQ5VTJ3 777 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 LUZP1Q86V48 1076 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 TTC30AQ86WT1 665 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 NUP93Q8N1F7 819 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 ANKRD20A12PQ8NF67 263 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 ASB16Q96NS5 453 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 RPP25Q9BUL9 199 aaKnown RBP23.68■■□□□ 1.38
PTCD3-203ENST00000409783 IGSF9Q9P2J2 1179 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 DNAJC12Q9UKB3 198 aa23.68■■□□□ 1.38
PTCD3-203ENST00000409783 FAM92AA1XBS5 289 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 DLL1O00548 723 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 CAVIN2O95810 425 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 CD19P15391 556 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 KLK7P49862 253 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 SLC5A3P53794 718 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 PTPN21Q16825 1174 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 ARHGAP44Q17R89 818 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 SMYD5Q6GMV2 418 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 GPRIN1Q7Z2K8 1008 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 ANKRD52Q8NB46 1076 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 SCAMP5Q8TAC9 235 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 LSM14BQ9BX40 385 aaKnown RBP23.67■■□□□ 1.38
PTCD3-203ENST00000409783 NAA15Q9BXJ9 866 aaKnown RBP23.67■■□□□ 1.38
PTCD3-203ENST00000409783 GPR88Q9GZN0 384 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 PLCB1Q9NQ66 1216 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 TSPAN16Q9UKR8 245 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 SIK3Q9Y2K2 1263 aa23.67■■□□□ 1.38
PTCD3-203ENST00000409783 TPM2P07951 284 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 PKDCCQ504Y2 493 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 GPR158Q5T848 1215 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 NXPE3Q969Y0 559 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 SLC46A2Q9BY10 475 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 GANQ9H2C0 597 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 TASP1Q9H6P5 420 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 TRPV4Q9HBA0 871 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 PNPLA8Q9NP80 782 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 FHOD1Q9Y613 1164 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 NUMBLQ9Y6R0 609 aa23.66■■□□□ 1.38
PTCD3-203ENST00000409783 RTN3O95197 1032 aaPredicted RBP23.65■■□□□ 1.38
PTCD3-203ENST00000409783 KRT5P13647 590 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 BRD2P25440 801 aaKnown RBP23.65■■□□□ 1.38
PTCD3-203ENST00000409783 CNGA2Q16280 664 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 GOLGA7BQ2TAP0 167 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 ARHGAP15Q53QZ3 475 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 FKBP15Q5T1M5 1219 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 TANGO2Q6ICL3 276 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 LCLAT1Q6UWP7 414 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 MTSS1LQ765P7 747 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 ZSCAN18Q8TBC5 510 aaPredicted RBP23.65■■□□□ 1.38
PTCD3-203ENST00000409783 SMARCD2Q92925 531 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 GCNAQ96QF7 691 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 SMOC2Q9H3U7 446 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 COMMD8Q9NX08 183 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 EHD2Q9NZN4 543 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 SORCS3Q9UPU3 1222 aa23.65■■□□□ 1.38
PTCD3-203ENST00000409783 MYO16Q9Y6X6 1858 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms