RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TRIM43BA6NCK2 446 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 MBD3L4A6NDZ8 208 aaPredicted RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 MBD3L3A6NE82 208 aaPredicted RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 ONECUT2O95948 504 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 MYF5P13349 255 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 RHCEP18577 417 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 KLRC1P26715 233 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 TPTEP56180 551 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 SOX10P56693 466 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 EEFSECP57772 596 aaKnown RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 RHDQ02161 417 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 MICU3Q86XE3 530 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 SPARTQ8N0X7 666 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 PPP2R3CQ969Q6 453 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 TRIM43Q96BQ3 446 aaPredicted RBP5.05□□□□□ -1.6
PMS1-203ENST00000409593 APIPQ96GX9 242 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 SH2B3Q9UQQ2 575 aa5.05□□□□□ -1.6
PMS1-203ENST00000409593 PROP1O75360 226 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 RASAL1O95294 804 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 PARNO95453 639 aaKnown RBP5.04□□□□□ -1.6
PMS1-203ENST00000409593 VNN1O95497 513 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 HRGP04196 525 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 FAM163BP0C2L3 166 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 ITGA8P53708 1063 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 FMO1Q01740 532 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 LY6KQ17RY6 165 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 ANKRD16Q6P6B7 361 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 ZNF804AQ7Z570 1209 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 WDR53Q7Z5U6 358 aaPredicted RBP5.04□□□□□ -1.6
PMS1-203ENST00000409593 ABRAQ8N0Z2 381 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 FANCBQ8NB91 859 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 NMD3Q96D46 503 aaKnown RBP5.04□□□□□ -1.6
PMS1-203ENST00000409593 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
PMS1-203ENST00000409593 APOL5Q9BWW9 433 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 GBA2Q9HCG7 927 aaPredicted RBP5.04□□□□□ -1.6
PMS1-203ENST00000409593 DLL3Q9NYJ7 618 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 SH3BP4Q9P0V3 963 aa5.04□□□□□ -1.6
PMS1-203ENST00000409593 H7C4K7 107 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 SRGAP2O75044 1071 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 NPSP0C0P6 89 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 PROK1P58294 105 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 C21orf58P58505 322 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 GALEQ14376 348 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 INSCQ1MX18 579 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 PTCHD3Q3KNS1 767 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 TMEM119Q4V9L6 283 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 PCID2Q5JVF3 399 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 CERCAMQ5T4B2 595 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 SLC9A4Q6AI14 798 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 ZNF788Q6ZQV5 615 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 IZUMO1Q8IYV9 350 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 DNAJB14Q8TBM8 379 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 DUSP22Q9NRW4 184 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 ADARB2Q9NS39 739 aaKnown RBP5.03□□□□□ -1.6
PMS1-203ENST00000409593 ITGB1BP2Q9UKP3 347 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 CDY1Q9Y6F8 540 aa5.03□□□□□ -1.6
PMS1-203ENST00000409593 LOC102723971A0A1B0GUV8 181 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 MANSC4A6NHS7 340 aaPredicted RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 RGS10O43665 173 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 ZNF37AP17032 561 aaPredicted RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 CCDC142Q17RM4 750 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 AARS2Q5JTZ9 985 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 SUMO4Q6EEV6 95 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 NAPRTQ6XQN6 538 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 DPY19L3Q6ZPD9 716 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 KCTD20Q7Z5Y7 419 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 CAND1Q86VP6 1230 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 SESTD1Q86VW0 696 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 SOCS4Q8WXH5 440 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 TBC1D5Q92609 795 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 C17orf80Q9BSJ5 609 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 COL20A1Q9P218 1284 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 CHPF2Q9P2E5 772 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 SNX13Q9Y5W8 968 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 RAB27BO00194 218 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 PTDSS1P48651 473 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 MTHFSP49914 203 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 NHLH1Q02575 133 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 FCRLBQ6BAA4 426 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 Q6ZWC4 215 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 PARS2Q7L3T8 475 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 DGKHQ86XP1 1220 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 RP9Q8TA86 221 aaKnown RBP5.02□□□□□ -1.61
PMS1-203ENST00000409593 ADAMTS5Q9UNA0 930 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 CORO2BQ9UQ03 480 aa5.02□□□□□ -1.61
PMS1-203ENST00000409593 TARM1B6A8C7 271 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 SMIM22K7EJ46 135 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 RBMXL2O75526 392 aaKnown RBP5.01□□□□□ -1.61
PMS1-203ENST00000409593 CTGFP29279 349 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 PRKAR1BP31321 381 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 CCNIQ14094 377 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 SLC29A2Q14542 456 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 ABHD11Q8NFV4 315 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 HASPINQ8TF76 798 aa5.01□□□□□ -1.61
PMS1-203ENST00000409593 TTC17Q96AE7 1141 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms