RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 MED23Q9ULK4 1368 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SPTBN4Q9H254 2564 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 C5orf60A6NFR6 353 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ENO4A6NNW6 628 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 TMEM232C9JQI7 657 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 E7ENQ6 273 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 CREB3O43889 395 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 JAK2O60674 1132 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PPP6R2O75170 966 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SMIM24O75264 130 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 FOSL2P15408 326 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PFKFB1P16118 471 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ZNF18P17022 549 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ITGB5P18084 799 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ALDH3A1P30838 453 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IL13P35225 146 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 MAGEA10P43363 369 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 RECQLP46063 649 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 GMPSP49915 693 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 ADKP55263 362 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 NLRP5P59047 1200 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 KRT83P78385 493 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SRSF3P84103 164 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 PFKPQ01813 784 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SLC6A3Q01959 620 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ROM1Q03395 351 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SPAG1Q07617 926 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 MYO1EQ12965 1108 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 STK3Q13188 491 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 TARBP2Q15633 366 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 IMMTQ16891 758 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 AMOTQ4VCS5 1084 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 CFAP58Q5T655 872 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 C1QTNF12Q5T7M4 302 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 GKAP1Q5VSY0 366 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 SLFN12LQ6IEE8 588 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 LRIG3Q6UXM1 1119 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 CCDC129Q6ZRS4 1044 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 APBB1IPQ7Z5R6 666 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 SESTD1Q86VW0 696 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PROSER1Q86XN7 944 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 FAM26EQ8N5C1 309 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 NSUN7Q8NE18 718 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 CALML6Q8TD86 181 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IGDCC4Q8TDY8 1250 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 RIN2Q8WYP3 895 aaPredicted RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 FERMT2Q96AC1 680 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 CYFIP2Q96F07 1278 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PHACTR3Q96KR7 559 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PLEKHG4BQ96PX9 1271 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 MYL10Q9BUA6 226 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ANO3Q9BYT9 981 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IQCGQ9H095 443 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 WNT8AQ9H1J5 351 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 VCXQ9H320 206 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IL1RAPL2Q9NP60 686 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 INTS13Q9NVM9 706 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 HAUS2Q9NVX0 235 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 ZNHIT6Q9NWK9 470 aaKnown RBP5.87□□□□□ -1.47
CLK1-202ENST00000409403 SIRT5Q9NXA8 310 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 RBPJLQ9UBG7 517 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 IP6K2Q9UHH9 426 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 PPP2R3BQ9Y5P8 575 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 NEDD4P46934 1319 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 SH3TC1Q8TE82 1336 aa5.87□□□□□ -1.47
CLK1-202ENST00000409403 NCAPD2Q15021 1401 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 GMNCA6NCL1 334 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 ZNF503-AS2A6NEH8 195 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 B4DLN1 442 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 E7EVH7 732 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 XPOTO43592 962 aaKnown RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 KRT86O43790 486 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 APOL3O95236 402 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 ANP32DO95626 131 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 MPIG6BO95866 241 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 SRGNP10124 158 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 TM4SF4P48230 202 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 CCNG1P51959 295 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 ELF3P78545 371 aaPredicted RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 BIRC3Q13489 604 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 MYBPC3Q14896 1274 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 CLUL1Q15846 466 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 SGSM1Q2NKQ1 1148 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 RRP12Q5JTH9 1297 aaKnown RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 SH2D4BQ5SQS7 431 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 TMEM240Q5SV17 173 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 PRAMEF9Q5VWM5 478 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 PRR5LQ6MZQ0 368 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 RAD9BQ6WBX8 426 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 MOB2Q70IA6 237 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 WDR75Q8IWA0 830 aaKnown RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 EIF1ADQ8N9N8 165 aaKnown RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 CCDC63Q8NA47 563 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 HVCN1Q96D96 273 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 LIN37Q96GY3 246 aaPredicted RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 C8orf48Q96LL4 319 aa5.86□□□□□ -1.47
CLK1-202ENST00000409403 CDC5LQ99459 802 aaKnown RBP5.86□□□□□ -1.47
CLK1-202ENST00000409403 GORASP1Q9BQQ3 440 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms