RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 GEMIN4P57678 1058 aaKnown RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 ATP1A4Q13733 1029 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 E2F2Q14209 437 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 PREPLQ4J6C6 727 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 CERCAMQ5T4B2 595 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 RAP1GAP2Q684P5 730 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 LIN54Q6MZP7 749 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 TAF2Q6P1X5 1199 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 LCNL1Q6ZST4 164 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 LRRTM4Q86VH4 590 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 C2CD5Q86YS7 1000 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 SLC44A2Q8IWA5 706 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 ABHD5Q8WTS1 349 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 FAM89AQ96GI7 184 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 ZDHHC12Q96GR4 267 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 SEC62Q99442 399 aaKnown RBP5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 WASH6PQ9NQA3 447 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 RAPGEFL1Q9UHV5 662 aa5.47□□□□□ -1.53
HMGB3P18-201ENST00000406327 A0A0B4J269 797 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 A0A1B0GTW7 788 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 CCDC196A0A1B0GTZ2 297 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 NPEPPSL1A6NEC2 478 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 OR2W5A6NFC9 320 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 CAPN14A8MX76 684 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRIAP1O43715 76 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SNX2O60749 519 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SRGAP2O75044 1071 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 FAM155BO75949 473 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 RECQL4O94761 1208 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 PRSS23O95084 383 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 GPANK1O95872 356 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 PYGLP06737 847 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SRGAP2BP0DMP2 458 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 PECAM1P16284 738 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 CHRM3P20309 590 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 ADD2P35612 726 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 MCM2P49736 904 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 NHLH2Q02577 135 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 TLE2Q04725 743 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 FOXL1Q12952 345 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 MYO1EQ12965 1108 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 HLXQ14774 488 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 CSRP2Q16527 193 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 FAM102AQ5T9C2 384 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 ARMC6Q6NXE6 501 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 TMEM108Q6UXF1 575 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SLC30A10Q6XR72 485 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 HTR3DQ70Z44 454 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 RSRC2Q7L4I2 434 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 MOGAT3Q86VF5 341 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SGMS1Q86VZ5 419 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SLC15A3Q8IY34 581 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 FTSJ3Q8IY81 847 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 OR56A1Q8NGH5 318 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 OR6Y1Q8NGX8 325 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 EIF2AK1Q9BQI3 630 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 NUDT22Q9BRQ3 303 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 DDX23Q9BUQ8 820 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRIM5Q9C035 493 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 PABPC3Q9H361 631 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 PRDM8Q9NQV8 689 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 SRP68Q9UHB9 627 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 EIF2B4Q9UI10 523 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 KCNE5Q9UJ90 142 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 FBXO9Q9UK97 447 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 ZFR2Q9UPR6 939 aaKnown RBP5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 CRYL1Q9Y2S2 319 aa5.46□□□□□ -1.54
HMGB3P18-201ENST00000406327 TNIKQ9UKE5 1360 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 A0A1W2PS29 197 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 EFCAB8A8MWE9 144 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 TRIM24O15164 1050 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 CD3EAPO15446 510 aaKnown RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 USP1O94782 785 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 KCNA3P22001 575 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 AARSP49588 968 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MAN2A2P49641 1150 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 NDUFV1P49821 464 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MTHFSP49914 203 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 BCAT1P54687 386 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 RPS7P62081 194 aaKnown RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 VAMP2P63027 116 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 CCNIQ14094 377 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 KCNAB1Q14722 419 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MANEALQ5VSG8 457 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MAATS1Q7Z4T9 603 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 CIR1Q86X95 450 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 C1QL4Q86Z23 238 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 SYT12Q8IV01 421 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 LRRC56Q8IYG6 542 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 FUKQ8N0W3 1084 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MBD3L2Q8NHZ7 208 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 SLC30A5Q8TAD4 765 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 PPP2R3CQ969Q6 453 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MNTQ99583 582 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 GPR87Q9BY21 358 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 RIC8AQ9NPQ8 531 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 RASSF1Q9NS23 344 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 MRPS18AQ9NVS2 196 aaKnown RBP5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 TBC1D30Q9Y2I9 924 aa5.45□□□□□ -1.54
HMGB3P18-201ENST00000406327 USP15Q9Y4E8 981 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms