RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TRIM74Q86UV6 250 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 TRIM73Q86UV7 250 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 SEPT1Q8WYJ6 367 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 OTUD5Q96G74 571 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 DHX33Q9H6R0 707 aaKnown RBP15.73■□□□□ 0.11
ATG4B-206ENST00000405546 PDLIM7Q9NR12 457 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 ASB3Q9Y575 518 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 B4GALT5O43286 388 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 CST8O60676 142 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 RFC1P35251 1148 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-206ENST00000405546 CLCN3P51790 818 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 LMNB2Q03252 620 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 SLC5A9Q2M3M2 681 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 MTHFD1LQ6UB35 978 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 LRRC74BQ6ZQY2 392 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 OTOAQ7RTW8 1153 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 RFX6Q8HWS3 928 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 KCTD6Q8NC69 237 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 DNAJC1Q96KC8 554 aaKnown RBP15.73■□□□□ 0.11
ATG4B-206ENST00000405546 FAM161BQ96MY7 647 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 ATAD5Q96QE3 1844 aa15.73■□□□□ 0.11
ATG4B-206ENST00000405546 CALB1P05937 261 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 SKIP12755 728 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 TNFAIP8L3Q5GJ75 292 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 LVRNQ6Q4G3 990 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 C4orf50Q6ZRC1 276 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 C15orf39Q6ZRI6 1047 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 SYDE1Q6ZW31 735 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 PALM2Q8IXS6 379 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 DRAXINQ8NBI3 349 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 TFAP2BQ92481 460 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 HEY2Q9UBP5 337 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 TOM1L1O75674 476 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 TGFB2P61812 414 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 LAMTOR4Q0VGL1 99 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 PDCD2Q16342 344 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 HSDL1Q3SXM5 330 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 SPOCD1Q6ZMY3 1216 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 KATNAL2Q8IYT4 538 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 COPS5Q92905 334 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 SMC6Q96SB8 1091 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 NDNQ99608 321 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 DCLRE1BQ9H816 532 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 ACADSP16219 412 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 MMP8P22894 467 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 ADRA1DP25100 572 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 NRLP54845 237 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 OGDHQ02218 1023 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 C1QBPQ07021 282 aaKnown RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 EFTUD2Q15029 972 aaKnown RBP eCLIP15.72■□□□□ 0.113e-7■■□□□ 14.3
ATG4B-206ENST00000405546 PLEKHA7Q6IQ23 1121 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 SHKBP1Q8TBC3 707 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 UBA3Q8TBC4 463 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 PYROXD1Q8WU10 500 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 NMD3Q96D46 503 aaKnown RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 ANKRD36BP1Q96IX9 119 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 MAK16Q9BXY0 300 aaKnown RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 NIF3L1Q9GZT8 377 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 PREBQ9HCU5 417 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 AFG3L2Q9Y4W6 797 aa15.72■□□□□ 0.11
ATG4B-206ENST00000405546 MAFBQ9Y5Q3 323 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-206ENST00000405546 A6NJR5 290 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 OPHN1O60890 802 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 RTP1P59025 263 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 STAT4Q14765 748 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 SGSM1Q2NKQ1 1148 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 DENND1BQ6P3S1 775 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 LRRC6Q86X45 466 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 PPFIBP2Q8ND30 876 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 KLRG1Q96E93 195 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 HEXIM2Q96MH2 286 aaKnown RBP15.71■□□□□ 0.11
ATG4B-206ENST00000405546 SLITRK1Q96PX8 696 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 TUBGCP5Q96RT8 1024 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 CSADQ9Y600 493 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 CCDC160A6NGH7 325 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 LIASO43766 372 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 CXCL8P10145 99 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 SSTR1P30872 391 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 ARL2P36404 184 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 CCNG1P51959 295 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 ZNF280AP59817 542 aaPredicted RBP15.71■□□□□ 0.11
ATG4B-206ENST00000405546 REPS2Q8NFH8 660 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 FBXO27Q8NI29 283 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 ACTL9Q8TC94 416 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 LRRN4Q8WUT4 740 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 SPATA33Q96N06 139 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 NFASCO94856 1347 aa15.71■□□□□ 0.11
ATG4B-206ENST00000405546 TMEM191CA6NGB0 347 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 RPS12P25398 132 aaKnown RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 SERPINB3P29508 390 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 GAD2Q05329 585 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 SPARCL1Q14515 664 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 ZNF667Q5HYK9 610 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 PPP1R21Q6ZMI0 780 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 RINLQ6ZS11 566 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 CENPUQ71F23 418 aa15.7■□□□□ 0.1
ATG4B-206ENST00000405546 PHF13Q86YI8 300 aaPredicted RBP15.7■□□□□ 0.1
ATG4B-206ENST00000405546 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms