RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 KRT72Q14CN4 511 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 FASTKD3Q14CZ7 662 aaKnown RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 BMT2Q1RMZ1 405 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 FAM102AQ5T9C2 384 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 PDPK2PQ6A1A2 396 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 TTC33Q6PID6 262 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 BNC2Q6ZN30 1099 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 DENND5BQ6ZUT9 1274 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ZBTB8OSQ8IWT0 167 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 KATNAL2Q8IYT4 538 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 MCUQ8NE86 351 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 KCNMB3Q9NPA1 279 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 THAP1Q9NVV9 213 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 LNPEPQ9UIQ6 1025 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 SYNJ2BP-COX16A0A087WUM0 186 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 PRR5-ARHGAP8B1AHC4 643 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 MAGEC1O60732 1142 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 CALCAP01258 141 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 THRAP10827 490 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 GLRA2P23416 452 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 STIP1P31948 543 aaKnown RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ARL4AP40617 200 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ALDH1A3P47895 512 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 OSTNP61366 133 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 PSMC5P62195 406 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ARHGAP8P85298 464 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 IFRD2Q12894 506 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ACAP1Q15027 740 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 TRIM16LQ309B1 348 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 CPNE8Q86YQ8 564 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 SEPT12Q8IYM1 358 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 C12orf50Q8NA57 414 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 GABPB2Q8TAK5 448 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 DNAJC1Q96KC8 554 aaKnown RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 GCOM2Q9BZD3 368 aaPredicted RBP7.69□□□□□ -1.18
HDAC9-202ENST00000405010 EBF3Q9H4W6 596 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ACSS3Q9H6R3 686 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 GPRC5CQ9NQ84 441 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 COX16Q9P0S2 106 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 PRKAG3Q9UGI9 489 aa7.69□□□□□ -1.18
HDAC9-202ENST00000405010 ATP8B3O60423 1300 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 LIASO43766 372 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 YY1P25490 414 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 GTF2H1P32780 548 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ABCD1P33897 745 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 TUBP50607 506 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 MRPS22P82650 360 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ATP13A4Q4VNC1 1196 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 FASTKD1Q53R41 847 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 HEATR6Q6AI08 1181 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ZNF554Q86TJ5 538 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SETD3Q86TU7 594 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SATL1Q86VE3 508 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ZNF354CQ86Y25 554 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 RNF148Q8N7C7 305 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SPIRE2Q8WWL2 714 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SHC3Q92529 594 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 HDAC11Q96DB2 347 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ANKRD36BP1Q96IX9 119 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 C10orf88Q9H8K7 445 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 TBC1D22BQ9NU19 505 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ETNK2Q9NVF9 386 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 IVNS1ABPQ9Y6Y0 642 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 LRRC37A3O60309 1634 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 DCXO43602 365 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 TCEA3O75764 348 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 BBOX1O75936 387 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 NR1H2P55055 460 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SNRPFP62306 86 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ATP1A4Q13733 1029 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 ZNF699Q32M78 642 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CYP4A22Q5TCH4 519 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SMIM5Q71RC9 77 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CLVS1Q8IUQ0 354 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 EFCAB3Q8N7B9 438 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CASP10Q92851 521 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 RTFDC1Q9BY42 306 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 FRMD8Q9BZ67 464 aaPredicted RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 TRIM15Q9C019 465 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 S100A14Q9HCY8 104 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 RRN3Q9NYV6 651 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 PACSIN3Q9UKS6 424 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 INPP5FQ9Y2H2 1132 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 AP4S1Q9Y587 144 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 AK5Q9Y6K8 562 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 RICTORQ6R327 1708 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CRYBG1Q9Y4K1 1723 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CAPN8A6NHC0 703 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 TCP10L2B9ZVM9 353 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 GLRA3O75311 464 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 SLITRK3O94933 977 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 GNAZP19086 355 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 CCNG1P51959 295 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 JAK3P52333 1124 aa7.68□□□□□ -1.18
HDAC9-202ENST00000405010 HADHBP55084 474 aaKnown RBP7.68□□□□□ -1.18
HDAC9-202ENST00000405010 PLOD1Q02809 727 aaPredicted RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms