RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TEPSINQ96N21 525 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 TWNKQ96RR1 684 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 TRIM55Q9BYV6 548 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 RNF19AQ9NV58 838 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 E2F8A0AVK6 867 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 INHBAP08476 426 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 KDELR1P24390 212 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 MIPP30301 263 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 PIGHQ14442 188 aaPredicted RBP12.53□□□□□ -0.4
RBM39-206ENST00000403542 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 SLC25A41Q8N5S1 370 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
RBM39-206ENST00000403542 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 NIF3L1Q9GZT8 377 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 RAB6BQ9NRW1 208 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.53□□□□□ -0.4
RBM39-206ENST00000403542 SLC24A2Q9UI40 661 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 ZNF214Q9UL59 606 aaPredicted RBP12.53□□□□□ -0.4
RBM39-206ENST00000403542 SNCAIPQ9Y6H5 919 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 BRCA2P51587 3418 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 INO80B-WBP1J3KQ70 363 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 CAPN9O14815 690 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 ZWINTO95229 277 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.4
RBM39-206ENST00000403542 ERBB2P04626 1255 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.4
RBM39-206ENST00000403542 DPEP1P16444 411 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 RASSF2P50749 326 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 CDH6P55285 790 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 SLC25A11Q02978 314 aaKnown RBP12.52□□□□□ -0.4
RBM39-206ENST00000403542 PARP6Q2NL67 630 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 ACSBG2Q5FVE4 666 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 ZNF276Q8N554 614 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 BANPQ8N9N5 519 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 ARMC2Q8NEN0 867 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.4
RBM39-206ENST00000403542 NMUR2Q9GZQ4 415 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 IQCGQ9H095 443 aaKnown RBP12.52□□□□□ -0.4
RBM39-206ENST00000403542 ACSS3Q9H6R3 686 aa12.52□□□□□ -0.4
RBM39-206ENST00000403542 CXorf49A8MYA2 514 aaPredicted RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 H3BRJ5 948 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 C2CD2LO14523 706 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 NAMPTP43490 491 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 RGS7P49802 495 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 BACE1P56817 501 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 MCL1Q07820 350 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 THEMIS2Q5TEJ8 643 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SHKBP1Q8TBC3 707 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 DNAJC9Q8WXX5 260 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 FAF2Q96CS3 445 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 MAGEB5Q9BZ81 275 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 R3HDMLQ9H3Y0 253 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 CYLDQ9NQC7 956 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SENP1Q9P0U3 644 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 DRG1Q9Y295 367 aaKnown RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 WASF2Q9Y6W5 498 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 KIAA1217Q5T5P2 1943 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 TCRBV5S1A1TA0A578 114 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 TRIM49D1C9J1S8 452 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 MCF2LO15068 1137 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 ATP5HO75947 161 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 APRTP07741 180 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 LINGO3P0C6S8 592 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 CXCL8P10145 99 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 ZNF132P52740 706 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 BLMHQ13867 455 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 DPYSL3Q14195 570 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 DUOXA2Q1HG44 320 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 ADGRD1Q6QNK2 874 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 C4orf50Q6ZRC1 276 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 PDCD7Q8N8D1 485 aaKnown RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 CYTH2Q99418 400 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 DHX33Q9H6R0 707 aaKnown RBP12.52□□□□□ -0.41
RBM39-206ENST00000403542 SLC17A6Q9P2U8 582 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 AFG3L2Q9Y4W6 797 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 MAD1L1Q9Y6D9 718 aa12.52□□□□□ -0.41
RBM39-206ENST00000403542 CCDC189A1A4V9 331 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 F7P08709 466 aaPredicted RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 THOC5Q13769 683 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 SNX30Q5VWJ9 437 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 TMEM154Q6P9G4 183 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 ARID3BQ8IVW6 561 aaPredicted RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 INPP5DQ92835 1189 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 PEBP4Q96S96 227 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
RBM39-206ENST00000403542 SYT15Q9BQS2 421 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 KCNK13Q9HB14 408 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 PIDD1Q9HB75 910 aa12.51□□□□□ -0.41
RBM39-206ENST00000403542 BATF3Q9NR55 127 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms